Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3225

Experiment: m.b. Tetracycline 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.006 mg/ml
3,393,236	+				-0.2
3,393,342	-		Dshi_3224	0.16	-0.3
3,393,382	-		Dshi_3224	0.20	-0.0
3,393,384	+		Dshi_3224	0.20	-0.9
3,393,396	-		Dshi_3224	0.21	+2.7
3,393,414	+		Dshi_3224	0.23	-1.1
3,393,532	-		Dshi_3224	0.34	+1.1
3,393,532	-		Dshi_3224	0.34	-2.3
3,393,569	+		Dshi_3224	0.37	-0.6
3,393,574	+		Dshi_3224	0.38	+1.3
3,393,577	-		Dshi_3224	0.38	+1.0
3,393,614	-		Dshi_3224	0.42	+0.7
3,393,715	+		Dshi_3224	0.51	-1.5
3,393,725	-		Dshi_3224	0.52	-0.6
3,393,748	-		Dshi_3224	0.54	-0.9
3,393,845	-		Dshi_3224	0.64	+0.0
3,393,943	+		Dshi_3224	0.73	-0.0
3,393,943	+		Dshi_3224	0.73	+1.1
3,393,951	-		Dshi_3224	0.74	-3.0
3,394,070	+		Dshi_3224	0.85	-2.7
3,394,078	-		Dshi_3224	0.86	-1.2
3,394,080	+		Dshi_3224	0.86	+0.7
3,394,088	-		Dshi_3224	0.86	+0.1
3,394,088	-		Dshi_3224	0.86	-2.8
3,394,211	+				+0.7
3,394,219	-				-2.3
3,394,256	-				-0.1
3,394,270	+				-3.7
3,394,270	+				-0.9
3,394,291	-				+0.1
3,394,337	+				+3.0
3,394,379	+		Dshi_3225	0.10	-0.3
3,394,409	-		Dshi_3225	0.12	+0.7
3,394,474	+		Dshi_3225	0.17	-1.3
3,394,479	+		Dshi_3225	0.17	-1.7
3,394,524	-		Dshi_3225	0.20	+1.8
3,394,552	+		Dshi_3225	0.22	-1.9
3,394,570	-		Dshi_3225	0.23	+0.1
3,394,650	-		Dshi_3225	0.29	+0.2
3,394,678	+		Dshi_3225	0.31	+0.2
3,394,721	-		Dshi_3225	0.34	+3.2
3,394,736	-		Dshi_3225	0.35	-0.0
3,394,908	+		Dshi_3225	0.47	-1.9
3,394,915	-		Dshi_3225	0.47	-0.5
3,394,915	-		Dshi_3225	0.47	-0.4
3,394,915	-		Dshi_3225	0.47	+1.7
3,394,951	+		Dshi_3225	0.50	+0.4
3,394,972	-		Dshi_3225	0.51	+1.8
3,395,054	+		Dshi_3225	0.57	-1.7
3,395,082	-		Dshi_3225	0.59	-0.9
3,395,156	+		Dshi_3225	0.64	+0.7
3,395,204	+		Dshi_3225	0.67	-0.3
3,395,208	-		Dshi_3225	0.68	+0.3
3,395,250	-		Dshi_3225	0.71	+3.2
3,395,374	-		Dshi_3225	0.79	+2.0
3,395,379	-		Dshi_3225	0.80	-4.3
3,395,389	-		Dshi_3225	0.80	-0.5
3,395,424	-		Dshi_3225	0.83	+1.7
3,395,519	+		Dshi_3225	0.89	+0.0
3,395,519	+		Dshi_3225	0.89	-1.3
3,395,527	-		Dshi_3225	0.90	+2.0
3,395,577	+				+0.1
3,395,731	+				-0.5
3,395,733	+				-0.3
3,395,749	+		Dshi_3226	0.13	-0.3
3,395,752	-		Dshi_3226	0.14	+0.8
3,395,776	+		Dshi_3226	0.23	+0.3
3,395,784	+		Dshi_3226	0.26	+0.0
3,395,793	+		Dshi_3226	0.29	-0.7
3,395,801	-		Dshi_3226	0.32	-0.5
3,395,853	+		Dshi_3226	0.51	-0.2
3,395,977	-				+1.5
3,395,998	-				+2.2
3,396,038	-				-0.4
3,396,062	-				+0.9
3,396,131	+		Dshi_3227	0.16	+0.4
3,396,178	+		Dshi_3227	0.22	-0.8
3,396,282	-		Dshi_3227	0.36	-0.9
3,396,366	+		Dshi_3227	0.46	-1.2
3,396,457	+		Dshi_3227	0.58	+0.7
3,396,463	+		Dshi_3227	0.59	-0.5
3,396,491	+		Dshi_3227	0.63	-2.2
3,396,530	+		Dshi_3227	0.68	-1.9
3,396,542	+		Dshi_3227	0.69	-0.3
3,396,609	-		Dshi_3227	0.78	+0.1