Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3020

Experiment: m.b. Tetracycline 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.006 mg/ml
3,188,477	-		Dshi_3018	0.23	-2.5
3,188,539	-		Dshi_3018	0.32	-0.1
3,188,558	+		Dshi_3018	0.35	+0.2
3,188,711	+		Dshi_3018	0.59	-1.2
3,188,719	-		Dshi_3018	0.60	-1.0
3,188,751	+		Dshi_3018	0.65	-1.6
3,188,871	-		Dshi_3018	0.83	+0.3
3,188,903	-		Dshi_3018	0.88	-2.8
3,188,930	-				-1.9
3,188,970	+				+0.6
3,188,988	-				-1.1
3,189,056	-		Dshi_3019	0.30	+0.9
3,189,127	+		Dshi_3019	0.60	+3.9
3,189,135	-		Dshi_3019	0.63	+0.7
3,189,200	-				+0.9
3,189,231	-				+0.1
3,189,249	-				-2.1
3,189,285	-				-0.3
3,189,423	-				-1.0
3,189,447	-				-2.3
3,189,465	+				+1.3
3,189,587	+		Dshi_3020	0.18	-0.4
3,189,686	+		Dshi_3020	0.26	-0.9
3,189,877	-		Dshi_3020	0.41	+0.5
3,189,877	-		Dshi_3020	0.41	-1.1
3,189,896	+		Dshi_3020	0.42	-2.1
3,190,021	+		Dshi_3020	0.52	+0.6
3,190,067	+		Dshi_3020	0.55	+1.3
3,190,112	+		Dshi_3020	0.59	-0.3
3,190,120	+		Dshi_3020	0.59	-0.9
3,190,178	-		Dshi_3020	0.64	-0.8
3,190,190	-		Dshi_3020	0.65	-2.0
3,190,207	+		Dshi_3020	0.66	-0.9
3,190,264	+		Dshi_3020	0.70	+0.7
3,190,291	-		Dshi_3020	0.73	+0.7
3,190,301	-		Dshi_3020	0.73	-1.1
3,190,322	-		Dshi_3020	0.75	+1.9
3,190,356	+		Dshi_3020	0.78	-1.3
3,190,646	+				-0.3
3,190,656	+				+0.4
3,190,672	-				-1.6
3,190,703	-				-1.5
3,190,763	-				-0.3
3,190,763	-				+0.7
3,190,820	+		Dshi_3021	0.10	+0.8
3,190,879	+		Dshi_3021	0.14	-0.2
3,190,954	+		Dshi_3021	0.19	-0.9
3,191,061	-		Dshi_3021	0.27	+0.7
3,191,093	-		Dshi_3021	0.29	+0.8
3,191,156	-		Dshi_3021	0.33	-0.8
3,191,183	+		Dshi_3021	0.35	+1.7
3,191,398	+		Dshi_3021	0.50	+0.7
3,191,414	+		Dshi_3021	0.51	-0.9
3,191,539	-		Dshi_3021	0.59	+0.4
3,191,539	-		Dshi_3021	0.59	+0.3
3,191,596	+		Dshi_3021	0.63	-2.5
3,191,608	+		Dshi_3021	0.64	+0.7
3,191,623	+		Dshi_3021	0.65	-0.5
3,191,627	-		Dshi_3021	0.65	+0.7
3,191,639	-		Dshi_3021	0.66	+2.3