Experiment: m.b. Tetracycline 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2794 and Dshi_2795 are separated by 6 nucleotides Dshi_2795 and Dshi_2796 are separated by 6 nucleotides Dshi_2796 and Dshi_2797 are separated by 125 nucleotides
Dshi_2794: Dshi_2794 - hypothetical protein (RefSeq), at 2,953,140 to 2,954,270
_2794
Dshi_2795: Dshi_2795 - hypothetical protein (RefSeq), at 2,954,277 to 2,955,392
_2795
Dshi_2796: Dshi_2796 - heat shock protein Hsp20 (RefSeq), at 2,955,399 to 2,955,857
_2796
Dshi_2797: Dshi_2797 - Fructokinase (EC 2.7.1.4) (from data) , at 2,955,983 to 2,956,909
_2797
Position (kb)
2954
2955
2956 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2953.365 kb on + strand, within Dshi_2794 at 2953.377 kb on + strand, within Dshi_2794 at 2953.445 kb on + strand, within Dshi_2794 at 2953.517 kb on - strand, within Dshi_2794 at 2953.542 kb on - strand, within Dshi_2794 at 2953.605 kb on + strand, within Dshi_2794 at 2953.712 kb on + strand, within Dshi_2794 at 2953.826 kb on - strand, within Dshi_2794 at 2953.842 kb on + strand, within Dshi_2794 at 2954.048 kb on + strand, within Dshi_2794 at 2954.233 kb on - strand at 2954.352 kb on + strand at 2954.444 kb on - strand, within Dshi_2795 at 2954.456 kb on + strand, within Dshi_2795 at 2954.510 kb on + strand, within Dshi_2795 at 2954.511 kb on + strand, within Dshi_2795 at 2954.636 kb on + strand, within Dshi_2795 at 2954.655 kb on - strand, within Dshi_2795 at 2954.678 kb on + strand, within Dshi_2795 at 2954.702 kb on + strand, within Dshi_2795 at 2954.710 kb on - strand, within Dshi_2795 at 2954.715 kb on + strand, within Dshi_2795 at 2954.774 kb on + strand, within Dshi_2795 at 2954.775 kb on + strand, within Dshi_2795 at 2954.831 kb on + strand, within Dshi_2795 at 2954.868 kb on - strand, within Dshi_2795 at 2954.906 kb on + strand, within Dshi_2795 at 2955.033 kb on - strand, within Dshi_2795 at 2955.052 kb on - strand, within Dshi_2795 at 2955.052 kb on - strand, within Dshi_2795 at 2955.056 kb on + strand, within Dshi_2795 at 2955.072 kb on - strand, within Dshi_2795 at 2955.196 kb on + strand, within Dshi_2795 at 2955.361 kb on + strand at 2955.624 kb on + strand, within Dshi_2796 at 2955.633 kb on + strand, within Dshi_2796 at 2955.677 kb on + strand, within Dshi_2796 at 2955.690 kb on + strand, within Dshi_2796 at 2955.705 kb on - strand, within Dshi_2796 at 2955.777 kb on - strand, within Dshi_2796 at 2955.792 kb on - strand, within Dshi_2796 at 2955.836 kb on - strand at 2955.972 kb on - strand at 2956.091 kb on - strand, within Dshi_2797 at 2956.115 kb on + strand, within Dshi_2797 at 2956.187 kb on + strand, within Dshi_2797 at 2956.350 kb on - strand, within Dshi_2797
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.006 mg/ml remove 2,953,365 + Dshi_2794 0.20 -0.9 2,953,377 + Dshi_2794 0.21 -1.5 2,953,445 + Dshi_2794 0.27 +0.4 2,953,517 - Dshi_2794 0.33 -0.9 2,953,542 - Dshi_2794 0.36 -0.6 2,953,605 + Dshi_2794 0.41 +0.7 2,953,712 + Dshi_2794 0.51 +0.7 2,953,826 - Dshi_2794 0.61 -0.9 2,953,842 + Dshi_2794 0.62 +0.7 2,954,048 + Dshi_2794 0.80 +0.3 2,954,233 - +1.0 2,954,352 + +0.3 2,954,444 - Dshi_2795 0.15 -1.6 2,954,456 + Dshi_2795 0.16 -0.4 2,954,510 + Dshi_2795 0.21 -0.4 2,954,511 + Dshi_2795 0.21 +0.7 2,954,636 + Dshi_2795 0.32 -1.6 2,954,655 - Dshi_2795 0.34 +1.0 2,954,678 + Dshi_2795 0.36 -2.1 2,954,702 + Dshi_2795 0.38 +0.0 2,954,710 - Dshi_2795 0.39 +2.3 2,954,715 + Dshi_2795 0.39 +0.2 2,954,774 + Dshi_2795 0.45 -0.2 2,954,775 + Dshi_2795 0.45 +0.4 2,954,831 + Dshi_2795 0.50 -0.3 2,954,868 - Dshi_2795 0.53 +1.7 2,954,906 + Dshi_2795 0.56 +0.7 2,955,033 - Dshi_2795 0.68 -2.0 2,955,052 - Dshi_2795 0.69 -0.1 2,955,052 - Dshi_2795 0.69 +0.7 2,955,056 + Dshi_2795 0.70 -1.3 2,955,072 - Dshi_2795 0.71 -2.3 2,955,196 + Dshi_2795 0.82 +2.3 2,955,361 + +0.7 2,955,624 + Dshi_2796 0.49 -1.1 2,955,633 + Dshi_2796 0.51 +0.7 2,955,677 + Dshi_2796 0.61 -3.3 2,955,690 + Dshi_2796 0.63 -1.6 2,955,705 - Dshi_2796 0.67 +0.7 2,955,777 - Dshi_2796 0.82 -0.9 2,955,792 - Dshi_2796 0.86 +2.5 2,955,836 - -0.3 2,955,972 - -2.5 2,956,091 - Dshi_2797 0.12 -1.0 2,956,115 + Dshi_2797 0.14 -1.9 2,956,187 + Dshi_2797 0.22 -0.9 2,956,350 - Dshi_2797 0.40 +2.7
Or see this region's nucleotide sequence