Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2641
Experiment: m.b. Tetracycline 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Tetracycline 0.006 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,797,868 | - | -0.0 | |||
2,797,868 | - | -1.7 | |||
2,798,093 | + | Dshi_2640 | 0.18 | -0.5 | |
2,798,182 | - | Dshi_2640 | 0.30 | -1.6 | |
2,798,558 | + | Dshi_2640 | 0.77 | +0.6 | |
2,798,571 | - | Dshi_2640 | 0.79 | -0.6 | |
2,798,677 | + | -2.1 | |||
2,798,677 | + | +1.5 | |||
2,798,685 | - | -1.5 | |||
2,798,687 | + | -2.5 | |||
2,799,085 | + | Dshi_2641 | 0.39 | +1.3 | |
2,799,192 | - | Dshi_2641 | 0.57 | +0.5 | |
2,799,367 | + | Dshi_2641 | 0.86 | +0.1 | |
2,799,446 | + | +0.9 | |||
2,799,454 | - | -0.6 | |||
2,799,811 | + | Dshi_2642 | 0.43 | +0.5 | |
2,800,035 | + | Dshi_2642 | 0.70 | -1.1 | |
2,800,269 | + | -3.1 | |||
2,800,311 | + | -0.0 | |||
2,800,374 | + | -1.4 | |||
2,800,430 | + | +0.5 |
Or see this region's nucleotide sequence