Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2471

Experiment: m.b. Tetracycline 0.006 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDshi_2470 and Dshi_2471 overlap by 4 nucleotidesDshi_2471 and Dshi_2472 are separated by 17 nucleotides Dshi_2470: Dshi_2470 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase (RefSeq), at 2,621,533 to 2,622,972 _2470 Dshi_2471: Dshi_2471 - UDP-N-acetylmuramyl-tripeptide synthetase (RefSeq), at 2,622,969 to 2,624,450 _2471 Dshi_2472: Dshi_2472 - Peptidoglycan glycosyltransferase (RefSeq), at 2,624,468 to 2,626,261 _2472 Position (kb) 2622 2623 2624 2625Strain fitness (log2 ratio) -1 0 1at 2624.514 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.006 mg/ml
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2,624,514 - +0.3

Or see this region's nucleotide sequence