Experiment: m.b. Tetracycline 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2442 and Dshi_2443 are separated by 51 nucleotides Dshi_2443 and Dshi_2444 overlap by 4 nucleotides
Dshi_2442: Dshi_2442 - aldehyde dehydrogenase (RefSeq), at 2,584,873 to 2,586,378
_2442
Dshi_2443: Dshi_2443 - 6-phosphogluconate dehydrogenase NAD-binding (RefSeq), at 2,586,430 to 2,587,299
_2443
Dshi_2444: Dshi_2444 - 4-hydroxythreonine-4-phosphate dehydrogenase (RefSeq), at 2,587,296 to 2,588,300
_2444
Position (kb)
2586
2587
2588 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2585.527 kb on + strand, within Dshi_2442 at 2585.740 kb on + strand, within Dshi_2442 at 2585.820 kb on + strand, within Dshi_2442 at 2585.934 kb on + strand, within Dshi_2442 at 2586.091 kb on - strand, within Dshi_2442 at 2586.094 kb on + strand, within Dshi_2442 at 2586.103 kb on - strand, within Dshi_2442 at 2586.244 kb on + strand at 2586.256 kb on - strand at 2586.324 kb on - strand at 2586.427 kb on + strand at 2586.535 kb on + strand, within Dshi_2443 at 2586.543 kb on - strand, within Dshi_2443 at 2586.543 kb on - strand, within Dshi_2443 at 2586.579 kb on - strand, within Dshi_2443 at 2586.611 kb on + strand, within Dshi_2443 at 2586.710 kb on + strand, within Dshi_2443 at 2586.750 kb on + strand, within Dshi_2443 at 2586.758 kb on - strand, within Dshi_2443 at 2586.763 kb on - strand, within Dshi_2443 at 2586.894 kb on - strand, within Dshi_2443 at 2586.992 kb on + strand, within Dshi_2443 at 2586.995 kb on - strand, within Dshi_2443 at 2586.998 kb on + strand, within Dshi_2443 at 2587.033 kb on - strand, within Dshi_2443 at 2587.091 kb on - strand, within Dshi_2443 at 2587.330 kb on + strand at 2587.453 kb on + strand, within Dshi_2444 at 2587.648 kb on + strand, within Dshi_2444 at 2587.650 kb on - strand, within Dshi_2444 at 2587.656 kb on + strand, within Dshi_2444 at 2587.827 kb on - strand, within Dshi_2444 at 2587.873 kb on - strand, within Dshi_2444 at 2588.002 kb on - strand, within Dshi_2444 at 2588.085 kb on + strand, within Dshi_2444 at 2588.125 kb on - strand, within Dshi_2444 at 2588.125 kb on - strand, within Dshi_2444 at 2588.259 kb on + strand at 2588.259 kb on - strand at 2588.260 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.006 mg/ml remove 2,585,527 + Dshi_2442 0.43 +1.8 2,585,740 + Dshi_2442 0.58 -0.8 2,585,820 + Dshi_2442 0.63 -1.3 2,585,934 + Dshi_2442 0.70 -3.2 2,586,091 - Dshi_2442 0.81 +0.2 2,586,094 + Dshi_2442 0.81 +2.2 2,586,103 - Dshi_2442 0.82 +2.6 2,586,244 + +0.2 2,586,256 - -1.3 2,586,324 - +0.7 2,586,427 + -3.1 2,586,535 + Dshi_2443 0.12 -0.3 2,586,543 - Dshi_2443 0.13 -2.1 2,586,543 - Dshi_2443 0.13 -3.1 2,586,579 - Dshi_2443 0.17 -2.3 2,586,611 + Dshi_2443 0.21 -0.0 2,586,710 + Dshi_2443 0.32 -0.8 2,586,750 + Dshi_2443 0.37 +0.8 2,586,758 - Dshi_2443 0.38 +0.2 2,586,763 - Dshi_2443 0.38 -0.3 2,586,894 - Dshi_2443 0.53 -1.9 2,586,992 + Dshi_2443 0.65 +0.2 2,586,995 - Dshi_2443 0.65 -3.1 2,586,998 + Dshi_2443 0.65 -1.8 2,587,033 - Dshi_2443 0.69 -0.5 2,587,091 - Dshi_2443 0.76 -0.8 2,587,330 + +3.1 2,587,453 + Dshi_2444 0.16 -2.7 2,587,648 + Dshi_2444 0.35 -3.6 2,587,650 - Dshi_2444 0.35 +0.3 2,587,656 + Dshi_2444 0.36 +2.6 2,587,827 - Dshi_2444 0.53 -0.7 2,587,873 - Dshi_2444 0.57 +0.3 2,588,002 - Dshi_2444 0.70 +1.3 2,588,085 + Dshi_2444 0.79 -1.9 2,588,125 - Dshi_2444 0.82 -2.3 2,588,125 - Dshi_2444 0.82 +0.4 2,588,259 + -1.1 2,588,259 - +0.3 2,588,260 + -3.2
Or see this region's nucleotide sequence