Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2192

Experiment: m.b. Tetracycline 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.006 mg/ml
2,318,375	+				+1.8
2,318,441	-				-0.6
2,318,468	+				-2.8
2,318,527	+				-0.8
2,318,527	+				+0.2
2,318,535	-				-1.3
2,318,535	-				-0.4
2,318,619	+		Dshi_2191	0.31	+2.6
2,318,627	+		Dshi_2191	0.34	-0.0
2,318,627	-		Dshi_2191	0.34	-2.2
2,318,627	-		Dshi_2191	0.34	-0.3
2,318,647	-		Dshi_2191	0.40	-0.8
2,318,647	-		Dshi_2191	0.40	-0.5
2,318,714	-		Dshi_2191	0.62	-0.8
2,318,768	+		Dshi_2191	0.79	+2.1
2,318,771	-		Dshi_2191	0.80	-0.0
2,318,773	+		Dshi_2191	0.81	-1.2
2,318,774	+		Dshi_2191	0.81	+1.6
2,318,774	+		Dshi_2191	0.81	+0.7
2,318,774	+		Dshi_2191	0.81	-1.6
2,318,774	+		Dshi_2191	0.81	-2.7
2,318,774	+		Dshi_2191	0.81	-0.9
2,318,774	+		Dshi_2191	0.81	-1.3
2,318,774	+		Dshi_2191	0.81	-2.0
2,318,774	+		Dshi_2191	0.81	-2.3
2,318,774	+		Dshi_2191	0.81	+0.1
2,318,775	-		Dshi_2191	0.81	-0.6
2,318,779	+		Dshi_2191	0.83	+2.8
2,318,781	-		Dshi_2191	0.83	+0.1
2,318,782	-		Dshi_2191	0.84	-1.3
2,318,782	-		Dshi_2191	0.84	+2.8
2,318,782	-		Dshi_2191	0.84	-3.1
2,318,782	-		Dshi_2191	0.84	-0.5
2,318,782	-		Dshi_2191	0.84	-1.3
2,318,782	-		Dshi_2191	0.84	-0.5
2,318,782	-		Dshi_2191	0.84	-1.6
2,318,782	-		Dshi_2191	0.84	-1.6
2,318,782	-		Dshi_2191	0.84	-1.0
2,318,782	-		Dshi_2191	0.84	-1.2
2,318,782	-		Dshi_2191	0.84	-0.6
2,318,782	-		Dshi_2191	0.84	-3.1
2,318,784	+		Dshi_2191	0.84	+1.8
2,318,786	+		Dshi_2191	0.85	+0.2
2,318,786	+		Dshi_2191	0.85	-2.4
2,318,786	+		Dshi_2191	0.85	-1.8
2,318,786	+		Dshi_2191	0.85	+0.7
2,318,786	+		Dshi_2191	0.85	+0.8
2,318,787	-		Dshi_2191	0.85	+0.2
2,318,787	-		Dshi_2191	0.85	+0.1
2,318,794	-		Dshi_2191	0.88	-0.1
2,318,794	-		Dshi_2191	0.88	+1.6
2,318,794	-		Dshi_2191	0.88	-0.2
2,318,794	-		Dshi_2191	0.88	-3.5
2,318,799	-		Dshi_2191	0.89	-1.5
2,318,799	-		Dshi_2191	0.89	-0.4
2,318,801	+				+0.6
2,318,821	-				-1.1
2,318,830	+				-3.8
2,318,895	-				+0.4
2,318,895	-				+0.8
2,318,917	+				-1.1
2,318,917	+				-0.8
2,318,925	-				-1.7
2,318,941	+				+0.2
2,318,941	+				-3.1
2,318,943	+				+0.2
2,318,943	+				-0.3
2,318,943	+				+0.9
2,318,943	+				-0.7
2,318,950	-				+1.8
2,318,951	-				-1.1
2,318,951	-				+0.0
2,318,962	+				-1.0
2,318,963	+				-1.6
2,318,964	+				+1.5
2,318,971	-				+1.8
2,318,971	-				+1.1
2,318,971	-				-0.5
2,318,972	-				+0.2
2,318,978	+				-0.8
2,318,983	+				-1.3
2,318,985	+				-0.1
2,318,985	+				-1.1
2,318,985	+				+2.6
2,318,988	+				-2.1
2,318,993	-				+0.2
2,318,998	+				+0.2
2,319,001	-				+0.1
2,319,026	+				+0.8
2,319,026	+				-1.1
2,319,028	+				-1.2
2,319,046	+				-0.4
2,319,046	+				-1.1
2,319,054	-				-0.4
2,319,054	-				-1.4
2,319,083	-				-0.2
2,319,088	-				-3.3
2,319,167	+				+0.7
2,319,167	+				-1.3
2,319,174	+				-3.1
2,319,175	+				-0.0
2,319,182	-				-0.5
2,319,183	-				-1.3
2,319,183	-				-0.5
2,319,194	-				-1.5
2,319,199	-				+0.2
2,319,267	+				+2.6
2,319,314	+				-1.1
2,319,314	+				-2.3
2,319,316	+				-2.6
2,319,316	+				+1.2
2,319,322	-				+3.6
2,319,322	-				-0.0
2,319,322	-				-0.4
2,319,322	-				+1.8
2,319,324	-				-2.1
2,319,330	-				+0.9
2,319,334	+				-0.5
2,319,347	+				-0.5
2,319,347	+				-1.7
2,319,355	-				+0.3
2,319,355	-				-0.3
2,319,355	-				-0.6
2,319,355	-				+0.1
2,319,360	+				+0.2
2,319,360	+				+0.2
2,319,360	+				-2.1
2,319,360	+				-2.3
2,319,360	+				-1.3
2,319,360	-				-0.6
2,319,365	-				-2.2
2,319,365	-				+0.2
2,319,365	-				+0.4
2,319,368	+				-0.5
2,319,368	-				-0.1
2,319,376	-				-2.0
2,319,376	-				+3.7
2,319,385	+				-1.8
2,319,385	+				-0.3
2,319,385	+				-1.6
2,319,393	-				+0.5
2,319,393	-				-1.0
2,319,403	+				-2.1
2,319,403	-				-3.1
2,319,439	-				-1.1
2,319,495	+				-0.6
2,319,521	+				-0.2
2,319,521	+				-0.6
2,319,521	+				-1.6
2,319,556	+		Dshi_2192	0.10	-0.3
2,319,569	+		Dshi_2192	0.11	-1.9
2,319,576	+		Dshi_2192	0.11	-2.0
2,319,577	-		Dshi_2192	0.11	-0.4
2,319,590	-		Dshi_2192	0.12	-0.8
2,319,605	-		Dshi_2192	0.13	+0.0
2,319,607	+		Dshi_2192	0.13	-3.1
2,319,607	+		Dshi_2192	0.13	-1.0
2,319,607	+		Dshi_2192	0.13	+0.9
2,319,607	+		Dshi_2192	0.13	+0.2
2,319,607	+		Dshi_2192	0.13	+0.5
2,319,610	-		Dshi_2192	0.13	+1.2
2,319,615	-		Dshi_2192	0.13	+0.6
2,319,615	-		Dshi_2192	0.13	-1.0
2,319,615	-		Dshi_2192	0.13	+1.8
2,319,615	-		Dshi_2192	0.13	-0.8
2,319,615	-		Dshi_2192	0.13	-2.5
2,319,627	-		Dshi_2192	0.14	-0.7
2,319,676	+		Dshi_2192	0.16	-0.3
2,319,676	+		Dshi_2192	0.16	+1.2
2,319,683	+		Dshi_2192	0.16	-1.8
2,319,684	-		Dshi_2192	0.16	-0.5
2,319,695	+		Dshi_2192	0.17	-0.4
2,319,744	+		Dshi_2192	0.19	-1.0
2,319,761	-		Dshi_2192	0.20	-0.6
2,319,777	-		Dshi_2192	0.20	+0.4
2,319,778	-		Dshi_2192	0.20	-0.8
2,319,818	-		Dshi_2192	0.22	+0.2
2,319,837	+		Dshi_2192	0.23	-2.3
2,319,850	-		Dshi_2192	0.24	+0.1
2,319,864	+		Dshi_2192	0.24	-0.8
2,319,864	+		Dshi_2192	0.24	-0.6
2,319,864	+		Dshi_2192	0.24	+1.2
2,319,864	+		Dshi_2192	0.24	-2.1
2,319,872	-		Dshi_2192	0.25	+0.1
2,319,888	+		Dshi_2192	0.26	+0.2
2,319,888	+		Dshi_2192	0.26	-1.7
2,319,896	-		Dshi_2192	0.26	-0.1
2,319,896	-		Dshi_2192	0.26	-1.1
2,319,896	-		Dshi_2192	0.26	+0.1
2,319,896	-		Dshi_2192	0.26	+0.2
2,319,906	-		Dshi_2192	0.26	+1.0
2,319,994	+		Dshi_2192	0.30	+0.6
2,320,190	-		Dshi_2192	0.39	-2.4
2,320,245	+		Dshi_2192	0.42	+1.2
2,320,262	+		Dshi_2192	0.43	+0.2
2,320,403	+		Dshi_2192	0.49	-1.7
2,320,406	-		Dshi_2192	0.49	-1.3
2,320,414	+		Dshi_2192	0.50	+0.9
2,320,414	+		Dshi_2192	0.50	-4.0
2,320,429	+		Dshi_2192	0.50	-1.8
2,320,583	-		Dshi_2192	0.57	+0.0
2,320,741	+		Dshi_2192	0.65	-1.0
2,320,796	-		Dshi_2192	0.67	+0.2
2,320,806	+		Dshi_2192	0.68	-2.3
2,320,820	-		Dshi_2192	0.68	-1.9
2,320,844	-		Dshi_2192	0.69	-1.2
2,320,854	-		Dshi_2192	0.70	-1.1
2,320,891	+		Dshi_2192	0.72	-1.3
2,320,896	+		Dshi_2192	0.72	-2.2
2,320,904	-		Dshi_2192	0.72	-0.2
2,320,916	+		Dshi_2192	0.73	-0.9
2,320,924	-		Dshi_2192	0.73	+2.8
2,320,970	+		Dshi_2192	0.75	+1.2
2,321,132	+		Dshi_2192	0.83	-3.8
2,321,187	+		Dshi_2192	0.85	-3.1
2,321,364	-				-1.3
2,321,442	-				-0.9
2,321,715	+				-1.5
2,321,736	+				+0.2
2,321,758	+				-0.2
2,321,868	+				+0.2
2,321,936	+		Dshi_2194	0.21	+0.2
2,321,936	+		Dshi_2194	0.21	-2.1
2,321,954	-		Dshi_2194	0.26	-3.3
2,321,959	-		Dshi_2194	0.27	+0.2
2,322,065	+		Dshi_2194	0.55	+0.1
2,322,197	+		Dshi_2194	0.89	-2.9
2,322,197	+		Dshi_2194	0.89	-0.3
2,322,231	+				+0.2
2,322,236	+				+2.2
2,322,239	-				+0.2
2,322,257	-				+0.2
2,322,267	+				+2.2
2,322,277	+				-0.5
2,322,301	+				-0.2
2,322,301	+				-1.3
2,322,309	-				-1.1
2,322,390	+				-0.3
2,322,429	-				-1.8
2,322,458	+				-1.2
2,322,494	-				-2.2