Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1718

Experiment: m.b. Tetracycline 0.006 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDshi_1716 and Dshi_1717 are separated by 200 nucleotidesDshi_1717 and Dshi_1718 are separated by 223 nucleotidesDshi_1718 and Dshi_1719 are separated by 35 nucleotides Dshi_1716: Dshi_1716 - hypothetical protein (RefSeq), at 1,784,400 to 1,784,858 _1716 Dshi_1717: Dshi_1717 - hypothetical protein (RefSeq), at 1,785,059 to 1,785,622 _1717 Dshi_1718: Dshi_1718 - ribosomal protein L32 (RefSeq), at 1,785,846 to 1,786,052 _1718 Dshi_1719: Dshi_1719 - fatty acid/phospholipid synthesis protein PlsX (RefSeq), at 1,786,088 to 1,787,245 _1719 Position (kb) 1785 1786 1787Strain fitness (log2 ratio) -3 -2 -1 0 1at 1785.509 kb on - strand, within Dshi_1717at 1785.521 kb on + strand, within Dshi_1717at 1785.535 kb on + strand, within Dshi_1717at 1785.660 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.006 mg/ml
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1,785,509 - Dshi_1717 0.80 +1.3
1,785,521 + Dshi_1717 0.82 -2.7
1,785,535 + Dshi_1717 0.84 -2.4
1,785,660 + -3.4

Or see this region's nucleotide sequence