Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1553
Experiment: m.b. Tetracycline 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Tetracycline 0.006 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,614,964 | - | Dshi_1552 | 0.37 | -1.8 | |
1,615,203 | - | Dshi_1552 | 0.56 | +0.2 | |
1,615,404 | - | Dshi_1552 | 0.72 | -2.1 | |
1,615,422 | - | Dshi_1552 | 0.74 | -0.8 | |
1,615,746 | + | -1.8 | |||
1,615,762 | - | -2.2 | |||
1,616,163 | + | Dshi_1553 | 0.63 | +0.7 | |
1,616,185 | + | Dshi_1553 | 0.67 | -0.4 | |
1,616,204 | + | Dshi_1553 | 0.70 | +0.9 | |
1,616,386 | + | -3.3 | |||
1,616,827 | - | Dshi_1554 | 0.56 | -1.8 | |
1,616,863 | - | Dshi_1554 | 0.61 | +2.8 | |
1,617,043 | + | Dshi_1554 | 0.84 | -3.4 | |
1,617,373 | + | Dshi_1555 | 0.23 | +1.1 |
Or see this region's nucleotide sequence