Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1089

Experiment: m.b. Tetracycline 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.006 mg/ml
1,116,072	-		Dshi_1088	0.52	+0.3
1,116,136	-		Dshi_1088	0.56	-0.3
1,116,193	+		Dshi_1088	0.59	-1.4
1,116,206	-		Dshi_1088	0.59	-1.7
1,116,206	-		Dshi_1088	0.59	+0.3
1,116,206	-		Dshi_1088	0.59	+2.1
1,116,250	-		Dshi_1088	0.62	-2.7
1,116,306	+		Dshi_1088	0.65	-0.2
1,116,313	+		Dshi_1088	0.65	-0.7
1,116,321	-		Dshi_1088	0.66	-0.3
1,116,416	+		Dshi_1088	0.71	-0.7
1,116,450	+		Dshi_1088	0.73	+0.9
1,116,463	-		Dshi_1088	0.74	+1.9
1,116,505	-		Dshi_1088	0.76	-1.3
1,116,823	+				+0.0
1,116,896	+				+0.3
1,116,904	-				+0.3
1,116,904	-				-1.4
1,116,906	+				-1.8
1,116,919	+				+0.5
1,116,969	+				+1.3
1,116,977	-				+0.3
1,117,027	+				-1.8
1,117,053	+				-1.1
1,117,075	+				-0.7
1,117,171	-		Dshi_1089	0.16	+1.3
1,117,201	+		Dshi_1089	0.19	-1.3
1,117,447	-		Dshi_1089	0.44	+2.9
1,117,450	+		Dshi_1089	0.44	-2.4
1,117,477	-		Dshi_1089	0.47	-0.7
1,117,481	-		Dshi_1089	0.47	+1.7
1,117,671	+		Dshi_1089	0.66	-1.5
1,117,690	+		Dshi_1089	0.68	-0.8
1,117,722	+		Dshi_1089	0.71	-1.5
1,117,732	-		Dshi_1089	0.72	-0.6
1,117,770	-		Dshi_1089	0.76	-3.8
1,117,822	-		Dshi_1089	0.81	+0.3
1,117,881	-		Dshi_1089	0.87	+0.3
1,117,886	-		Dshi_1089	0.88	-0.5
1,117,926	+				-1.2
1,118,239	-		Dshi_1090	0.34	-0.9
1,118,250	+		Dshi_1090	0.37	-1.5
1,118,252	+		Dshi_1090	0.37	-1.7
1,118,287	+		Dshi_1090	0.44	-0.1
1,118,320	-		Dshi_1090	0.51	+1.3
1,118,431	+		Dshi_1090	0.73	-1.6
1,118,431	+		Dshi_1090	0.73	-1.2
1,118,621	+				+0.1
1,118,643	+				-0.8
1,118,645	-				-0.2
1,118,715	-		Dshi_1091	0.12	-0.7
1,118,771	+		Dshi_1091	0.16	-0.7
1,118,800	-		Dshi_1091	0.19	+0.4
1,118,858	-				+0.3
1,118,999	-		Dshi_1091	0.34	-1.0