Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_0993

Experiment: m.b. Tetracycline 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.006 mg/ml
1,021,132	+				-0.1
1,021,139	-				+2.4
1,021,139	-				+2.4
1,021,147	-				-0.1
1,021,147	-				-1.0
1,021,163	-				-1.3
1,021,171	-				-0.4
1,021,171	-				+0.0
1,021,171	-				+0.4
1,021,173	-				-1.3
1,021,174	+				-1.3
1,021,184	+				+0.3
1,021,197	+				-0.5
1,021,197	+				+0.7
1,021,199	+				-0.1
1,021,207	-				-0.0
1,021,209	+				-2.5
1,021,217	-				-0.4
1,021,277	-				-0.6
1,021,287	-				+0.9
1,021,318	+				-0.5
1,021,332	-				-0.0
1,021,335	+				-0.5
1,021,372	+				-0.8
1,021,408	+				-1.0
1,021,408	+				+0.2
1,021,416	-				+0.4
1,021,416	-				+1.4
1,021,459	-				-0.7
1,021,461	+				+0.7
1,021,469	-				-0.5
1,021,583	+				-0.2
1,021,591	-				-0.4
1,021,907	-				-0.9
1,021,909	+				+1.0
1,021,925	+				-0.2
1,021,933	-				-0.3
1,021,973	+				-2.2
1,021,981	-				+1.2
1,021,981	-				-0.8
1,022,008	+				+1.0
1,022,008	+				-0.9
1,022,016	-				+0.3
1,022,018	+				-1.3
1,022,025	+				+1.2
1,022,033	-				-1.2
1,022,090	-				+0.4
1,022,101	+				-0.9
1,022,134	-				-0.9
1,022,157	+				+1.3
1,022,186	-				-0.6
1,022,246	+		Dshi_0993	0.14	+1.4
1,022,288	-		Dshi_0993	0.18	+0.5
1,022,335	+		Dshi_0993	0.23	-1.2
1,022,375	+		Dshi_0993	0.27	-0.5
1,022,396	+		Dshi_0993	0.29	-0.2
1,022,405	-		Dshi_0993	0.30	+0.1
1,022,435	+		Dshi_0993	0.33	-0.3
1,022,442	+		Dshi_0993	0.34	-1.0
1,022,465	-		Dshi_0993	0.36	+0.3
1,022,470	-		Dshi_0993	0.37	+0.4
1,022,482	+		Dshi_0993	0.38	+0.4
1,022,507	+		Dshi_0993	0.41	+1.1
1,022,545	-		Dshi_0993	0.45	+0.4
1,022,553	-		Dshi_0993	0.45	-1.2
1,022,582	+		Dshi_0993	0.48	-0.9
1,022,590	-		Dshi_0993	0.49	+0.7
1,022,645	-		Dshi_0993	0.55	+3.1
1,022,694	-		Dshi_0993	0.60	+0.5
1,022,717	+		Dshi_0993	0.62	+2.0
1,022,724	-		Dshi_0993	0.63	-1.6
1,022,732	+		Dshi_0993	0.64	+0.6
1,022,735	-		Dshi_0993	0.64	-0.5
1,022,876	-		Dshi_0993	0.79	-0.5
1,022,886	-		Dshi_0993	0.80	+1.8
1,022,896	+		Dshi_0993	0.81	-0.7
1,022,896	+		Dshi_0993	0.81	-2.4
1,022,904	-		Dshi_0993	0.81	-3.1
1,022,904	-		Dshi_0993	0.81	+1.1
1,022,904	-		Dshi_0993	0.81	-0.8
1,022,906	+		Dshi_0993	0.82	+0.5
1,022,914	-		Dshi_0993	0.83	-0.1
1,022,914	-		Dshi_0993	0.83	+0.1
1,022,929	+		Dshi_0993	0.84	-0.3
1,023,014	+				+2.4
1,023,046	+				-1.3
1,023,062	-				-0.2
1,023,080	-				+1.5
1,023,164	+				+0.4
1,023,180	-				-0.7
1,023,189	+				+0.7
1,023,194	+				+0.7
1,023,195	-				-0.3
1,023,202	+				+0.4
1,023,210	-				-0.5
1,023,215	-				+0.4
1,023,240	+				+0.2
1,023,344	+		Dshi_0994	0.10	+3.0
1,023,352	-		Dshi_0994	0.11	+1.7
1,023,378	+		Dshi_0994	0.12	-0.3
1,023,407	+		Dshi_0994	0.13	+3.2
1,023,415	+		Dshi_0994	0.14	+0.1
1,023,427	+		Dshi_0994	0.14	+0.2
1,023,432	+		Dshi_0994	0.15	-0.6
1,023,432	+		Dshi_0994	0.15	+1.7
1,023,458	+		Dshi_0994	0.16	-2.9
1,023,466	-		Dshi_0994	0.16	-0.4
1,023,473	+		Dshi_0994	0.17	-1.9
1,023,534	-		Dshi_0994	0.20	-0.1
1,023,568	-		Dshi_0994	0.22	-0.5
1,023,581	-		Dshi_0994	0.22	-1.3
1,023,614	+		Dshi_0994	0.24	-2.4
1,023,630	-		Dshi_0994	0.25	-1.2
1,023,630	-		Dshi_0994	0.25	-0.7
1,023,687	-		Dshi_0994	0.28	-0.9
1,023,730	+		Dshi_0994	0.30	-0.2
1,023,935	+		Dshi_0994	0.41	-0.2
1,023,976	-		Dshi_0994	0.43	+0.1
1,023,982	-		Dshi_0994	0.43	-1.0
1,024,021	+		Dshi_0994	0.45	-0.3
1,024,052	+		Dshi_0994	0.47	-1.1