Experiment: m.b. Tetracycline 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0964 and Dshi_0965 are separated by 111 nucleotides
Dshi_0964: Dshi_0964 - hypothetical protein (RefSeq), at 987,364 to 987,915
_0964
Dshi_0965: Dshi_0965 - hypothetical protein (RefSeq), at 988,027 to 988,380
_0965
Position (kb)
987
988 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 986.465 kb on - strand at 986.582 kb on + strand at 986.625 kb on + strand at 986.632 kb on - strand at 986.942 kb on - strand at 986.994 kb on + strand at 987.082 kb on + strand at 987.116 kb on + strand at 987.126 kb on + strand at 987.175 kb on - strand at 987.180 kb on - strand at 987.207 kb on + strand at 987.214 kb on + strand at 987.253 kb on + strand at 987.265 kb on + strand at 987.265 kb on + strand at 987.273 kb on - strand at 987.290 kb on - strand at 987.293 kb on + strand at 987.293 kb on + strand at 987.310 kb on + strand at 987.328 kb on - strand at 987.397 kb on - strand at 987.426 kb on - strand, within Dshi_0964 at 987.470 kb on - strand, within Dshi_0964 at 987.470 kb on - strand, within Dshi_0964 at 987.496 kb on + strand, within Dshi_0964 at 987.649 kb on + strand, within Dshi_0964 at 987.649 kb on + strand, within Dshi_0964 at 987.657 kb on - strand, within Dshi_0964 at 987.775 kb on - strand, within Dshi_0964 at 987.795 kb on - strand, within Dshi_0964 at 988.008 kb on - strand at 988.022 kb on - strand at 988.044 kb on + strand at 988.052 kb on - strand at 988.088 kb on + strand, within Dshi_0965 at 988.116 kb on + strand, within Dshi_0965 at 988.136 kb on + strand, within Dshi_0965 at 988.153 kb on - strand, within Dshi_0965 at 988.167 kb on + strand, within Dshi_0965 at 988.183 kb on - strand, within Dshi_0965 at 988.219 kb on - strand, within Dshi_0965 at 988.298 kb on - strand, within Dshi_0965 at 988.298 kb on - strand, within Dshi_0965 at 988.321 kb on - strand, within Dshi_0965 at 988.333 kb on + strand, within Dshi_0965 at 988.361 kb on + strand at 988.369 kb on - strand at 988.376 kb on + strand at 988.392 kb on - strand at 988.393 kb on - strand at 988.548 kb on - strand at 988.551 kb on + strand at 988.552 kb on + strand at 988.555 kb on - strand at 988.561 kb on - strand at 988.567 kb on - strand at 988.663 kb on + strand at 988.670 kb on + strand at 988.707 kb on + strand at 988.715 kb on - strand at 988.747 kb on - strand at 988.851 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.006 mg/ml remove 986,465 - +0.2 986,582 + -0.6 986,625 + +0.2 986,632 - -1.1 986,942 - -2.8 986,994 + -0.3 987,082 + +0.3 987,116 + +2.2 987,126 + -0.2 987,175 - +0.2 987,180 - -0.1 987,207 + +2.4 987,214 + -0.2 987,253 + -0.6 987,265 + -0.5 987,265 + -0.9 987,273 - +0.5 987,290 - -0.0 987,293 + +0.2 987,293 + -3.7 987,310 + -0.2 987,328 - -0.6 987,397 - -1.2 987,426 - Dshi_0964 0.11 -0.1 987,470 - Dshi_0964 0.19 +1.4 987,470 - Dshi_0964 0.19 -0.5 987,496 + Dshi_0964 0.24 +0.0 987,649 + Dshi_0964 0.52 +1.0 987,649 + Dshi_0964 0.52 -0.5 987,657 - Dshi_0964 0.53 -0.2 987,775 - Dshi_0964 0.74 +0.6 987,795 - Dshi_0964 0.78 -0.5 988,008 - -0.5 988,022 - +0.4 988,044 + +0.2 988,052 - -1.0 988,088 + Dshi_0965 0.17 -0.8 988,116 + Dshi_0965 0.25 +0.7 988,136 + Dshi_0965 0.31 +2.0 988,153 - Dshi_0965 0.36 +2.7 988,167 + Dshi_0965 0.40 -0.9 988,183 - Dshi_0965 0.44 -0.5 988,219 - Dshi_0965 0.54 +0.4 988,298 - Dshi_0965 0.77 -3.8 988,298 - Dshi_0965 0.77 -0.6 988,321 - Dshi_0965 0.83 -1.2 988,333 + Dshi_0965 0.86 +0.2 988,361 + -2.0 988,369 - +3.4 988,376 + +0.2 988,392 - +0.9 988,393 - -1.3 988,548 - -0.3 988,551 + -0.3 988,552 + +0.4 988,555 - -1.1 988,561 - +1.3 988,567 - -0.6 988,663 + -0.5 988,670 + +2.9 988,707 + +0.4 988,715 - -0.6 988,747 - -1.3 988,851 - -1.0
Or see this region's nucleotide sequence