Experiment: m.b. Tetracycline 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0836 and Dshi_0837 are separated by 11 nucleotides Dshi_0837 and Dshi_0838 are separated by 280 nucleotides Dshi_0838 and Dshi_0839 are separated by 73 nucleotides
Dshi_0836: Dshi_0836 - acetyl-CoA acetyltransferase (RefSeq), at 846,270 to 847,481
_0836
Dshi_0837: Dshi_0837 - Glutathione S-transferase domain (RefSeq), at 847,493 to 848,128
_0837
Dshi_0838: Dshi_0838 - acyl-CoA dehydrogenase domain protein (RefSeq), at 848,409 to 849,557
_0838
Dshi_0839: Dshi_0839 - acyl-CoA dehydrogenase domain protein (RefSeq), at 849,631 to 851,409
_0839
Position (kb) 848
849
850 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 847.440 kb on - strand at 847.472 kb on - strand at 847.511 kb on + strand at 847.511 kb on + strand at 847.520 kb on + strand at 847.533 kb on - strand at 847.554 kb on + strand at 847.555 kb on + strand at 847.561 kb on - strand, within Dshi_0837 at 847.562 kb on - strand, within Dshi_0837 at 847.615 kb on + strand, within Dshi_0837 at 847.672 kb on + strand, within Dshi_0837 at 847.682 kb on + strand, within Dshi_0837 at 847.885 kb on - strand, within Dshi_0837 at 847.933 kb on + strand, within Dshi_0837 at 847.942 kb on - strand, within Dshi_0837 at 848.004 kb on - strand, within Dshi_0837 at 848.004 kb on - strand, within Dshi_0837 at 848.137 kb on - strand at 848.158 kb on - strand at 848.165 kb on + strand at 848.168 kb on - strand at 848.254 kb on + strand at 848.257 kb on - strand at 848.269 kb on - strand at 848.381 kb on - strand at 848.389 kb on - strand at 848.407 kb on + strand at 848.415 kb on - strand at 848.490 kb on - strand at 848.666 kb on - strand, within Dshi_0838 at 848.667 kb on + strand, within Dshi_0838 at 848.694 kb on + strand, within Dshi_0838 at 848.697 kb on - strand, within Dshi_0838 at 848.725 kb on - strand, within Dshi_0838 at 848.959 kb on - strand, within Dshi_0838 at 848.980 kb on + strand, within Dshi_0838 at 849.010 kb on + strand, within Dshi_0838 at 849.012 kb on + strand, within Dshi_0838 at 849.263 kb on - strand, within Dshi_0838 at 849.394 kb on + strand, within Dshi_0838 at 849.397 kb on - strand, within Dshi_0838 at 849.407 kb on - strand, within Dshi_0838 at 849.547 kb on + strand at 849.547 kb on - strand at 849.550 kb on + strand at 849.550 kb on - strand at 849.552 kb on + strand at 849.558 kb on - strand at 849.560 kb on - strand at 849.622 kb on + strand at 849.698 kb on - strand at 849.823 kb on - strand, within Dshi_0839 at 849.825 kb on + strand, within Dshi_0839 at 849.828 kb on - strand, within Dshi_0839 at 849.828 kb on - strand, within Dshi_0839 at 849.833 kb on - strand, within Dshi_0839 at 849.926 kb on + strand, within Dshi_0839 at 849.996 kb on - strand, within Dshi_0839 at 850.162 kb on + strand, within Dshi_0839 at 850.207 kb on + strand, within Dshi_0839 at 850.316 kb on - strand, within Dshi_0839
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.006 mg/ml remove 847,440 - +0.3 847,472 - -1.1 847,511 + -0.7 847,511 + +1.0 847,520 + +0.7 847,533 - +3.0 847,554 + +0.8 847,555 + -0.7 847,561 - Dshi_0837 0.11 +1.0 847,562 - Dshi_0837 0.11 -1.2 847,615 + Dshi_0837 0.19 -1.9 847,672 + Dshi_0837 0.28 -1.7 847,682 + Dshi_0837 0.30 -1.2 847,885 - Dshi_0837 0.62 +1.1 847,933 + Dshi_0837 0.69 -1.6 847,942 - Dshi_0837 0.71 -0.3 848,004 - Dshi_0837 0.80 -0.1 848,004 - Dshi_0837 0.80 -1.3 848,137 - +1.3 848,158 - +1.9 848,165 + +0.1 848,168 - +2.1 848,254 + +1.8 848,257 - -1.3 848,269 - -1.2 848,381 - +1.1 848,389 - -3.0 848,407 + -0.7 848,415 - -0.5 848,490 - +0.5 848,666 - Dshi_0838 0.22 -1.6 848,667 + Dshi_0838 0.22 -0.5 848,694 + Dshi_0838 0.25 +3.5 848,697 - Dshi_0838 0.25 +1.5 848,725 - Dshi_0838 0.28 +0.4 848,959 - Dshi_0838 0.48 -0.3 848,980 + Dshi_0838 0.50 -0.2 849,010 + Dshi_0838 0.52 +0.4 849,012 + Dshi_0838 0.52 +0.9 849,263 - Dshi_0838 0.74 -1.8 849,394 + Dshi_0838 0.86 -0.2 849,397 - Dshi_0838 0.86 -0.3 849,407 - Dshi_0838 0.87 +0.0 849,547 + -1.8 849,547 - -0.5 849,550 + -0.8 849,550 - +0.5 849,552 + +0.9 849,558 - -0.8 849,560 - -0.5 849,622 + +0.0 849,698 - -2.9 849,823 - Dshi_0839 0.11 -2.6 849,825 + Dshi_0839 0.11 +0.8 849,828 - Dshi_0839 0.11 +0.5 849,828 - Dshi_0839 0.11 -2.5 849,833 - Dshi_0839 0.11 -2.6 849,926 + Dshi_0839 0.17 +1.2 849,996 - Dshi_0839 0.21 -0.3 850,162 + Dshi_0839 0.30 +0.3 850,207 + Dshi_0839 0.32 +0.8 850,316 - Dshi_0839 0.39 +2.9
Or see this region's nucleotide sequence