Experiment: m.b. Tetracycline 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0742 and Dshi_0743 are separated by 162 nucleotides Dshi_0743 and Dshi_0744 are separated by 81 nucleotides
Dshi_0742: Dshi_0742 - protein of unknown function UPF0118 (RefSeq), at 749,426 to 750,511
_0742
Dshi_0743: Dshi_0743 - MscS Mechanosensitive ion channel (RefSeq), at 750,674 to 752,056
_0743
Dshi_0744: Dshi_0744 - prolyl-tRNA synthetase (RefSeq), at 752,138 to 753,475
_0744
Position (kb) 750
751
752
753 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 750.514 kb on - strand at 750.514 kb on - strand at 750.578 kb on - strand at 750.656 kb on - strand at 750.670 kb on + strand at 750.739 kb on + strand at 750.747 kb on - strand at 750.760 kb on - strand at 750.788 kb on - strand at 750.800 kb on + strand at 750.891 kb on + strand, within Dshi_0743 at 750.923 kb on - strand, within Dshi_0743 at 751.014 kb on + strand, within Dshi_0743 at 751.034 kb on + strand, within Dshi_0743 at 751.044 kb on + strand, within Dshi_0743 at 751.129 kb on - strand, within Dshi_0743 at 751.194 kb on - strand, within Dshi_0743 at 751.260 kb on + strand, within Dshi_0743 at 751.261 kb on + strand, within Dshi_0743 at 751.268 kb on - strand, within Dshi_0743 at 751.425 kb on - strand, within Dshi_0743 at 751.479 kb on + strand, within Dshi_0743 at 751.479 kb on + strand, within Dshi_0743 at 751.487 kb on - strand, within Dshi_0743 at 751.519 kb on - strand, within Dshi_0743 at 751.539 kb on - strand, within Dshi_0743 at 751.576 kb on + strand, within Dshi_0743 at 751.582 kb on + strand, within Dshi_0743 at 751.595 kb on + strand, within Dshi_0743 at 751.608 kb on - strand, within Dshi_0743 at 751.609 kb on - strand, within Dshi_0743 at 751.705 kb on + strand, within Dshi_0743 at 751.712 kb on - strand, within Dshi_0743 at 751.712 kb on - strand, within Dshi_0743 at 751.723 kb on - strand, within Dshi_0743 at 751.792 kb on - strand, within Dshi_0743 at 751.888 kb on - strand, within Dshi_0743 at 752.033 kb on + strand at 752.078 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.006 mg/ml remove 750,514 - +2.2 750,514 - +0.6 750,578 - -2.5 750,656 - -0.8 750,670 + -2.0 750,739 + +0.6 750,747 - -2.2 750,760 - -2.2 750,788 - -0.8 750,800 + -2.2 750,891 + Dshi_0743 0.16 +0.6 750,923 - Dshi_0743 0.18 -1.0 751,014 + Dshi_0743 0.25 -2.4 751,034 + Dshi_0743 0.26 +0.6 751,044 + Dshi_0743 0.27 -1.0 751,129 - Dshi_0743 0.33 -0.9 751,194 - Dshi_0743 0.38 -2.0 751,260 + Dshi_0743 0.42 -0.1 751,261 + Dshi_0743 0.42 -1.6 751,268 - Dshi_0743 0.43 -2.0 751,425 - Dshi_0743 0.54 +0.6 751,479 + Dshi_0743 0.58 -1.2 751,479 + Dshi_0743 0.58 -1.4 751,487 - Dshi_0743 0.59 -0.8 751,519 - Dshi_0743 0.61 +1.6 751,539 - Dshi_0743 0.63 -2.8 751,576 + Dshi_0743 0.65 +0.8 751,582 + Dshi_0743 0.66 -0.6 751,595 + Dshi_0743 0.67 +0.6 751,608 - Dshi_0743 0.68 +0.8 751,609 - Dshi_0743 0.68 -0.8 751,705 + Dshi_0743 0.75 +0.6 751,712 - Dshi_0743 0.75 +3.2 751,712 - Dshi_0743 0.75 +0.3 751,723 - Dshi_0743 0.76 -1.0 751,792 - Dshi_0743 0.81 +0.6 751,888 - Dshi_0743 0.88 +0.6 752,033 + -2.2 752,078 + -1.0
Or see this region's nucleotide sequence