Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_0445

Experiment: m.b. Tetracycline 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.006 mg/ml
433,113	-		Dshi_0443	0.39	-0.9
433,193	+		Dshi_0443	0.48	-0.2
433,331	+		Dshi_0443	0.62	+1.3
433,368	+		Dshi_0443	0.66	+1.3
433,384	+		Dshi_0443	0.68	-1.8
433,476	+		Dshi_0443	0.78	+0.2
433,522	+		Dshi_0443	0.82	-0.1
433,558	+		Dshi_0443	0.86	-0.5
433,600	+				-0.7
433,625	+				-0.7
433,652	+				-1.3
433,673	+				+1.6
433,673	+				+2.3
433,681	-				-2.6
433,769	+		Dshi_0444	0.15	+1.3
433,784	+		Dshi_0444	0.20	+1.3
433,784	+		Dshi_0444	0.20	+1.8
433,807	+		Dshi_0444	0.28	+1.6
433,831	+		Dshi_0444	0.37	+0.1
433,902	-		Dshi_0444	0.61	+0.8
433,917	+		Dshi_0444	0.67	+1.3
433,918	-		Dshi_0444	0.67	-1.5
433,952	+		Dshi_0444	0.79	-0.8
433,960	-		Dshi_0444	0.82	+1.8
433,989	+				-1.7
433,990	+				-2.6
434,011	+				-1.0
434,024	-				+0.8
434,030	-				+0.3
434,058	+				+2.2
434,117	-		Dshi_0445	0.18	-2.0
434,150	+		Dshi_0445	0.26	+0.2
434,159	+		Dshi_0445	0.29	-0.3
434,167	-		Dshi_0445	0.31	+0.1
434,182	+		Dshi_0445	0.35	-0.8
434,205	+		Dshi_0445	0.40	-0.5
434,213	-		Dshi_0445	0.42	+0.2
434,217	+		Dshi_0445	0.44	-4.3
434,217	+		Dshi_0445	0.44	+0.1
434,264	+		Dshi_0445	0.55	+0.2
434,270	-		Dshi_0445	0.57	-1.3
434,291	-		Dshi_0445	0.62	-0.8
434,301	+		Dshi_0445	0.65	-0.4
434,322	-		Dshi_0445	0.70	-1.3
434,327	+		Dshi_0445	0.72	-0.5
434,376	-		Dshi_0445	0.84	-1.3
434,418	+				-0.8
434,447	+				-0.4
434,447	+				+0.2
434,447	+				-2.1
434,454	-				-1.3
434,454	-				+1.1
434,455	-				-0.8
434,455	-				-0.3
434,455	-				-3.7
434,457	+				-0.7
434,474	+				+2.1
434,496	+				+1.4
434,524	+				-0.2
434,533	-				-0.2
434,553	+				-1.4
434,594	+				-1.7
434,598	+				-0.3
434,599	+				-0.5
434,625	+		Dshi_0446	0.14	-0.6
434,644	-		Dshi_0446	0.18	-0.9
434,683	+		Dshi_0446	0.28	-2.8
434,727	+		Dshi_0446	0.38	+0.3
434,763	+		Dshi_0446	0.47	-1.5
434,780	-		Dshi_0446	0.51	+1.2
434,840	-		Dshi_0446	0.66	-1.8
434,887	+		Dshi_0446	0.77	-0.5
434,945	+				-1.1
435,025	+				-1.8
435,067	+		Dshi_0447	0.11	-3.3
435,082	+		Dshi_0447	0.13	-0.3
435,139	-		Dshi_0447	0.20	-0.8
435,251	+		Dshi_0447	0.34	-0.2
435,259	-		Dshi_0447	0.35	-2.3
435,278	+		Dshi_0447	0.38	-0.4
435,301	+		Dshi_0447	0.41	-4.4
435,301	+		Dshi_0447	0.41	-1.0
435,301	+		Dshi_0447	0.41	-1.7
435,309	-		Dshi_0447	0.42	-0.4
435,309	-		Dshi_0447	0.42	-1.0
435,424	+		Dshi_0447	0.56	-0.5
435,427	-		Dshi_0447	0.57	-0.3
435,427	-		Dshi_0447	0.57	-0.9
435,427	-		Dshi_0447	0.57	+2.2