Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_0422

Experiment: m.b. Tetracycline 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.006 mg/ml
414,170	+		Dshi_0421	0.48	-0.3
414,201	-		Dshi_0421	0.50	+0.2
414,210	-		Dshi_0421	0.50	-0.1
414,231	+		Dshi_0421	0.52	+0.7
414,248	+		Dshi_0421	0.53	-4.8
414,271	+		Dshi_0421	0.54	-2.3
414,282	+		Dshi_0421	0.55	-1.8
414,292	+		Dshi_0421	0.55	-1.5
414,295	-		Dshi_0421	0.56	+1.9
414,311	-		Dshi_0421	0.57	-1.9
414,335	+		Dshi_0421	0.58	+0.2
414,343	-		Dshi_0421	0.59	-0.7
414,343	-		Dshi_0421	0.59	-2.5
414,387	+		Dshi_0421	0.62	-1.1
414,424	+		Dshi_0421	0.64	+0.2
414,429	+		Dshi_0421	0.64	-1.3
414,535	+		Dshi_0421	0.71	-2.3
414,566	+		Dshi_0421	0.73	-2.5
414,568	+		Dshi_0421	0.73	-0.6
414,570	+		Dshi_0421	0.73	-1.2
414,577	-		Dshi_0421	0.74	-2.7
414,582	+		Dshi_0421	0.74	-0.0
414,590	-		Dshi_0421	0.75	-0.7
414,590	-		Dshi_0421	0.75	-4.2
414,644	-		Dshi_0421	0.78	-2.1
414,674	+		Dshi_0421	0.80	-1.8
414,674	+		Dshi_0421	0.80	-1.6
414,679	+		Dshi_0421	0.81	+1.3
414,681	+		Dshi_0421	0.81	-1.7
414,682	-		Dshi_0421	0.81	+1.3
414,682	-		Dshi_0421	0.81	+2.3
414,682	-		Dshi_0421	0.81	-0.7
414,682	-		Dshi_0421	0.81	-0.3
414,745	+		Dshi_0421	0.85	-1.9
414,748	-		Dshi_0421	0.85	+0.2
414,766	+		Dshi_0421	0.86	+0.6
414,799	+		Dshi_0421	0.88	-1.7
414,802	-		Dshi_0421	0.88	-1.0
414,813	+		Dshi_0421	0.89	-0.2
414,925	-				-2.5
414,930	-				-0.5
414,951	+				-3.4
414,988	+				-1.1
414,996	-				-0.7
415,015	-				-2.3
415,030	-				-1.5
415,045	+				-1.7
415,055	+				+2.3
415,063	-				+2.3
415,135	+				-2.0
415,140	+				-1.7
415,238	-		Dshi_0422	0.14	-0.4
415,298	+		Dshi_0422	0.26	-0.5
415,340	-		Dshi_0422	0.34	-0.9
415,346	+		Dshi_0422	0.35	-2.0
415,408	+		Dshi_0422	0.47	-0.4
415,408	+		Dshi_0422	0.47	-0.1
415,408	+		Dshi_0422	0.47	-1.2
415,408	+		Dshi_0422	0.47	-1.8
415,408	+		Dshi_0422	0.47	+0.6
415,408	+		Dshi_0422	0.47	-0.6
415,416	-		Dshi_0422	0.48	-0.3
415,416	-		Dshi_0422	0.48	-1.7
415,416	-		Dshi_0422	0.48	-1.7
415,416	-		Dshi_0422	0.48	-0.7
415,416	-		Dshi_0422	0.48	-0.3
415,418	+		Dshi_0422	0.49	-0.3
415,433	-		Dshi_0422	0.52	-1.8
415,439	-		Dshi_0422	0.53	+2.3
415,448	+		Dshi_0422	0.54	+0.7
415,453	+		Dshi_0422	0.55	-1.4
415,504	+		Dshi_0422	0.65	+0.3
415,516	-		Dshi_0422	0.67	+0.3
415,519	+		Dshi_0422	0.68	+0.2
415,538	-		Dshi_0422	0.72	-1.4
415,592	+		Dshi_0422	0.82	+0.3
415,646	+				-1.3
415,747	-				+0.4
415,759	+				-0.8
415,759	+				+0.3
415,759	+				+2.0
415,759	+				-0.7
415,767	-				-0.0
415,767	-				-2.0
415,775	-				-0.3
415,984	-		Dshi_0423	0.30	-1.1
415,984	-		Dshi_0423	0.30	-1.4
415,986	-		Dshi_0423	0.31	+0.0
416,006	-		Dshi_0423	0.33	+1.7
416,008	+		Dshi_0423	0.34	-1.2
416,015	+		Dshi_0423	0.35	-1.7
416,063	+		Dshi_0423	0.41	+2.3
416,063	+		Dshi_0423	0.41	-2.0
416,071	-		Dshi_0423	0.42	-1.8
416,071	-		Dshi_0423	0.42	+0.3
416,088	+		Dshi_0423	0.45	-1.7
416,088	+		Dshi_0423	0.45	-0.5
416,123	-		Dshi_0423	0.50	-1.1
416,219	+		Dshi_0423	0.63	-3.9
416,273	-		Dshi_0423	0.70	-0.9
416,297	-		Dshi_0423	0.74	+0.3
416,309	+		Dshi_0423	0.75	-0.9
416,317	-		Dshi_0423	0.76	-1.7
416,405	-		Dshi_0423	0.88	-1.9
416,425	+				-0.4
416,427	+				-1.9
416,433	+				+0.3
416,505	-				-0.4
416,512	-				+0.0
416,530	-				-0.9
416,557	+				-0.9
416,562	+				+1.3
416,565	-				-0.4
416,629	+				-2.0
416,631	+				+0.3
416,668	+				-1.3
416,675	+				-1.9
416,676	-				-0.7