Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_0102

Experiment: m.b. Tetracycline 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.006 mg/ml
98,910	+				+2.7
98,912	+				-1.7
98,912	+				+2.7
98,912	+				-0.4
98,912	+				-0.3
98,912	+				-0.0
98,912	+				-1.8
98,912	+				-1.7
98,918	+				-1.9
98,918	-				-0.8
98,918	-				-2.9
98,920	-				-0.9
98,920	-				-0.2
98,920	-				-1.9
98,920	-				+0.7
98,920	-				-3.7
98,920	-				+1.9
98,920	-				+0.7
98,920	-				-0.7
98,920	-				+0.4
98,920	-				-2.7
98,923	+				-0.7
98,923	+				+0.2
98,931	-				-0.1
98,931	-				+0.3
98,933	+				-0.3
98,941	-				+0.7
98,941	-				-1.7
99,088	+				-0.9
99,088	+				-3.5
99,088	+				-3.4
99,088	+				+0.7
99,096	-				+2.0
99,096	-				+0.7
99,099	-				-2.1
99,114	+				-2.5
99,133	+				-2.1
99,133	+				-3.0
99,141	+				-3.1
99,143	+				-0.3
99,149	+				+0.7
99,149	-				-3.5
99,149	-				+0.7
99,157	+				-3.2
99,157	-				-1.1
99,172	+				-2.3
99,172	+				-5.0
99,172	+				-1.5
99,172	+				-3.5
99,175	-				-1.3
99,180	-				+0.7
99,180	-				-2.7
99,180	-				-1.3
99,182	+				-2.0
99,182	+				-3.1
99,184	+				+0.4
99,192	+				-1.3
99,201	-				+0.7
99,220	+				+0.5
99,225	-				+0.7
99,234	+				-3.2
99,235	+				-4.6
99,235	-				+0.7
99,244	+				-2.7
99,251	-				+0.7
99,251	-				+0.7
99,261	+				-0.8
99,261	+				-0.3
99,261	+				+0.7
99,261	+				-1.3
99,263	+				-0.3
99,269	-				+0.7
99,269	-				-3.7
99,271	-				+0.7
99,271	-				-0.7
99,283	+				-3.8
99,324	-		Dshi_0101	0.17	+0.7
99,343	+		Dshi_0101	0.24	+0.7
99,348	+		Dshi_0101	0.26	-2.1
99,370	-		Dshi_0101	0.34	+0.7
99,386	+		Dshi_0101	0.41	-3.4
99,429	+		Dshi_0101	0.57	+0.7
99,453	+		Dshi_0101	0.67	-1.8
99,455	+		Dshi_0101	0.67	-1.3
99,461	-		Dshi_0101	0.70	-0.6
99,465	+		Dshi_0101	0.71	-2.1
99,465	+		Dshi_0101	0.71	+0.7
99,473	-		Dshi_0101	0.74	+0.7
99,473	-		Dshi_0101	0.74	+0.7
99,473	-		Dshi_0101	0.74	+0.7
99,473	-		Dshi_0101	0.74	-0.9
99,489	+		Dshi_0101	0.81	+0.4
99,489	+		Dshi_0101	0.81	+0.7
99,525	+				+3.0
99,576	+				+1.7
99,586	-				+1.7
99,627	+				+2.3
99,693	-				+1.7
99,693	-				+2.3
99,694	-				+1.7
99,734	-				-0.3
99,744	-				-2.7
99,757	+				-0.5
99,766	+				-2.5
99,782	-				-1.7
99,897	+				-0.4
99,921	+				+0.7
99,924	+				+0.3
99,924	+				+0.3
99,924	+				-0.1
99,924	+				-0.8
99,924	+				-0.8
99,932	-				+3.3
99,933	-				-0.5
99,953	-				+0.2
99,968	+				-0.6
99,983	+				-1.1
99,986	-				+0.7
100,001	-				-2.5
100,064	+				-0.7
100,064	+				-0.2
100,064	+				-0.3
100,072	-				+1.3
100,072	-				+0.7
100,073	-				-0.9
100,077	-				+0.3
100,188	+		Dshi_0102	0.12	-1.1
100,188	+		Dshi_0102	0.12	+0.7
100,188	+		Dshi_0102	0.12	-1.5
100,196	-		Dshi_0102	0.12	-1.0
100,196	-		Dshi_0102	0.12	+0.3
100,196	-		Dshi_0102	0.12	-0.9
100,200	-		Dshi_0102	0.12	-1.9
100,208	+		Dshi_0102	0.12	-0.5
100,216	-		Dshi_0102	0.13	+1.4
100,244	-		Dshi_0102	0.14	-1.3
100,334	+		Dshi_0102	0.17	-0.3
100,342	-		Dshi_0102	0.17	-1.3
100,344	+		Dshi_0102	0.17	-0.6
100,393	+		Dshi_0102	0.19	+1.5
100,425	+		Dshi_0102	0.20	-0.1
100,463	+		Dshi_0102	0.21	+0.8
100,470	+		Dshi_0102	0.21	-0.7
100,479	-		Dshi_0102	0.21	+0.2
100,540	-		Dshi_0102	0.23	+1.3
100,598	+		Dshi_0102	0.25	-1.3
100,598	+		Dshi_0102	0.25	+0.7
100,606	-		Dshi_0102	0.26	+2.7
100,606	-		Dshi_0102	0.26	-0.2
100,611	-		Dshi_0102	0.26	-1.3
100,676	-		Dshi_0102	0.28	+0.3
100,716	-		Dshi_0102	0.29	+0.9
100,769	-		Dshi_0102	0.31	-0.7
100,782	-		Dshi_0102	0.32	+0.0
100,855	+		Dshi_0102	0.34	+1.8
100,857	-		Dshi_0102	0.34	+1.2
100,887	-		Dshi_0102	0.35	+0.2
101,015	+		Dshi_0102	0.39	-0.6
101,016	-		Dshi_0102	0.39	-1.6
101,158	+		Dshi_0102	0.44	-0.9
101,193	-		Dshi_0102	0.45	-3.7
101,217	+		Dshi_0102	0.46	-0.7
101,217	+		Dshi_0102	0.46	-1.1
101,255	+		Dshi_0102	0.47	-0.9
101,294	+		Dshi_0102	0.49	+1.0
101,336	+		Dshi_0102	0.50	-0.8
101,345	-		Dshi_0102	0.50	-0.0
101,455	+		Dshi_0102	0.54	-0.1
101,468	+		Dshi_0102	0.55	-0.2
101,470	+		Dshi_0102	0.55	-0.3
101,478	-		Dshi_0102	0.55	-0.3
101,483	-		Dshi_0102	0.55	+1.3
101,483	-		Dshi_0102	0.55	-1.3
101,506	+		Dshi_0102	0.56	-1.3
101,839	-		Dshi_0102	0.67	-0.6
101,867	+		Dshi_0102	0.68	+1.2
101,903	+		Dshi_0102	0.69	-0.5
101,942	+		Dshi_0102	0.70	-0.1
101,942	+		Dshi_0102	0.70	+1.4
101,973	-		Dshi_0102	0.71	-1.2
101,977	+		Dshi_0102	0.72	-0.3
102,028	-		Dshi_0102	0.73	+2.7
102,034	-		Dshi_0102	0.74	-3.2
102,043	+		Dshi_0102	0.74	+1.8
102,080	+		Dshi_0102	0.75	-1.7
102,088	-		Dshi_0102	0.75	+3.3
102,088	-		Dshi_0102	0.75	+1.7
102,149	-		Dshi_0102	0.77	+3.8
102,273	+		Dshi_0102	0.82	-0.3
102,307	+		Dshi_0102	0.83	+0.1
102,318	-		Dshi_0102	0.83	-0.3
102,339	+		Dshi_0102	0.84	+0.1
102,347	+		Dshi_0102	0.84	+1.2
102,417	+		Dshi_0102	0.86	-0.6
102,418	-		Dshi_0102	0.86	-1.7
102,453	+		Dshi_0102	0.88	-1.3
102,459	+		Dshi_0102	0.88	+0.5
102,468	+		Dshi_0102	0.88	-0.0
102,612	-				+2.3
102,612	-				+0.1
102,623	-				+0.3
102,733	-				+0.7
102,739	+				+1.3
102,792	+				-2.5
102,841	+				+1.8
102,849	-				+0.1
102,849	-				+0.7
102,922	+				+0.6
102,929	-				-1.3
102,945	+				-0.5
103,000	+				-0.7
103,000	+				-0.5
103,008	-				+2.3
103,015	-				-2.0
103,028	+				+2.7
103,036	-				-0.5
103,080	+		Dshi_0103	0.13	+1.0
103,091	+		Dshi_0103	0.14	+1.3
103,152	-		Dshi_0103	0.20	+0.1
103,240	+		Dshi_0103	0.28	-1.4
103,248	-		Dshi_0103	0.29	-0.5
103,264	+		Dshi_0103	0.30	-0.4
103,362	-		Dshi_0103	0.39	+0.7
103,395	+		Dshi_0103	0.42	-0.1
103,454	+		Dshi_0103	0.47	+0.4
103,530	-		Dshi_0103	0.54	-2.4
103,584	+		Dshi_0103	0.59	-0.5
103,592	-		Dshi_0103	0.59	+0.9
103,652	+		Dshi_0103	0.65	-2.5
103,665	+		Dshi_0103	0.66	-0.5
103,696	-		Dshi_0103	0.69	-0.3
103,711	+		Dshi_0103	0.70	-0.4
103,744	-		Dshi_0103	0.73	+0.3
103,772	-		Dshi_0103	0.76	-0.1