Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_0053

Experiment: m.b. Tetracycline 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.006 mg/ml
49,292	+		Dshi_0051	0.15	-1.7
49,292	+		Dshi_0051	0.15	-1.7
49,297	-		Dshi_0051	0.16	+0.9
49,338	+		Dshi_0051	0.26	+3.0
49,385	+		Dshi_0051	0.37	+0.7
49,397	+		Dshi_0051	0.40	-1.3
49,405	-		Dshi_0051	0.42	+4.3
49,410	+		Dshi_0051	0.43	-1.7
49,410	-		Dshi_0051	0.43	-0.3
49,423	-		Dshi_0051	0.47	+1.3
49,492	+		Dshi_0051	0.63	+0.7
49,500	-		Dshi_0051	0.65	-0.5
49,507	+		Dshi_0051	0.67	+2.7
49,507	+		Dshi_0051	0.67	-2.8
49,513	-		Dshi_0051	0.68	-0.7
49,513	-		Dshi_0051	0.68	+1.4
49,513	-		Dshi_0051	0.68	-1.6
49,513	-		Dshi_0051	0.68	+1.9
49,521	+		Dshi_0051	0.70	+0.7
49,522	+		Dshi_0051	0.70	-3.1
49,552	+		Dshi_0051	0.77	+0.7
49,552	+		Dshi_0051	0.77	+0.7
49,640	+				+2.8
49,648	-				+0.0
49,648	-				+1.1
49,648	-				-0.2
49,648	-				-2.0
49,648	-				-0.3
49,652	+				+0.7
49,652	+				-0.3
49,660	-				-0.7
49,660	-				-0.5
49,660	-				+2.7
49,660	-				-1.1
49,660	-				+0.7
49,660	-				-0.4
49,660	-				+0.3
49,703	-		Dshi_0052	0.22	-1.3
49,731	-		Dshi_0052	0.35	-2.9
49,775	+		Dshi_0052	0.56	-1.8
49,783	-		Dshi_0052	0.60	-0.5
49,796	-		Dshi_0052	0.66	-3.3
49,798	-		Dshi_0052	0.67	-3.0
49,884	-				-0.2
49,987	+				-2.7
49,995	-				-0.3
50,022	-				+0.7
50,122	+		Dshi_0053	0.15	+0.3
50,149	+		Dshi_0053	0.17	+0.7
50,224	-		Dshi_0053	0.23	-1.1
50,224	-		Dshi_0053	0.23	-2.5
50,224	-		Dshi_0053	0.23	+0.7
50,496	-		Dshi_0053	0.45	-0.3
50,601	-		Dshi_0053	0.54	-1.7
50,611	+				+0.7
50,677	+		Dshi_0053	0.60	+0.3
51,271	-		Dshi_0054	0.22	-2.5
51,321	-		Dshi_0054	0.30	-0.3
51,358	-		Dshi_0054	0.37	-0.1
51,369	-		Dshi_0054	0.38	+0.7
51,396	+		Dshi_0054	0.43	-0.6
51,419	+		Dshi_0054	0.47	-1.3
51,419	+		Dshi_0054	0.47	-1.9
51,421	+		Dshi_0054	0.47	-2.5
51,427	-		Dshi_0054	0.48	-0.9
51,429	-		Dshi_0054	0.49	+2.3
51,474	-		Dshi_0054	0.56	-1.7
51,488	-		Dshi_0054	0.59	-2.3
51,657	+		Dshi_0054	0.87	+0.2
51,707	+				+0.7
51,709	+				+0.2
51,717	-				+0.7
51,726	-				-0.3
51,736	-				+1.5
51,738	+				-0.9