Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c30220

Experiment: m.b. Nickel (II) chloride 0.625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nickel (II) chloride 0.625 mM
3,158,867	+		PGA1_c30200	0.47	-0.2
3,158,876	+		PGA1_c30200	0.48	-0.7
3,158,947	+		PGA1_c30200	0.57	+0.3
3,158,947	-		PGA1_c30200	0.57	+0.7
3,159,097	+		PGA1_c30200	0.75	+0.4
3,159,100	+		PGA1_c30200	0.75	-0.2
3,159,146	-		PGA1_c30200	0.81	+0.9
3,159,146	-		PGA1_c30200	0.81	+0.7
3,159,175	+		PGA1_c30200	0.84	-2.0
3,159,188	-		PGA1_c30200	0.86	+0.9
3,159,220	-		PGA1_c30200	0.90	+1.7
3,159,241	-				-2.4
3,159,299	-				+0.6
3,159,389	+		PGA1_c30210	0.15	-0.1
3,159,416	+		PGA1_c30210	0.21	-0.2
3,159,416	+		PGA1_c30210	0.21	+1.8
3,159,416	+		PGA1_c30210	0.21	-2.4
3,159,443	+		PGA1_c30210	0.26	-2.1
3,159,449	+		PGA1_c30210	0.28	+2.5
3,159,451	-		PGA1_c30210	0.28	-0.0
3,159,451	-		PGA1_c30210	0.28	+0.4
3,159,465	-		PGA1_c30210	0.31	-0.9
3,159,465	-		PGA1_c30210	0.31	-1.6
3,159,471	-		PGA1_c30210	0.32	-0.7
3,159,513	-		PGA1_c30210	0.41	+0.6
3,159,536	+		PGA1_c30210	0.46	+0.5
3,159,544	-		PGA1_c30210	0.48	+0.4
3,159,568	+		PGA1_c30210	0.53	+0.2
3,159,568	+		PGA1_c30210	0.53	-1.1
3,159,568	+		PGA1_c30210	0.53	+0.6
3,159,568	+		PGA1_c30210	0.53	+0.6
3,159,568	+		PGA1_c30210	0.53	-1.2
3,159,571	+		PGA1_c30210	0.54	+0.4
3,159,576	-		PGA1_c30210	0.55	+0.1
3,159,576	-		PGA1_c30210	0.55	-0.0
3,159,576	-		PGA1_c30210	0.55	-2.1
3,159,576	-		PGA1_c30210	0.55	+0.0
3,159,576	-		PGA1_c30210	0.55	-0.7
3,159,576	-		PGA1_c30210	0.55	-0.2
3,159,579	-		PGA1_c30210	0.55	+0.3
3,159,663	+		PGA1_c30210	0.73	-1.3
3,159,663	+		PGA1_c30210	0.73	+0.3
3,159,671	-		PGA1_c30210	0.75	+1.6
3,159,679	+		PGA1_c30210	0.77	-0.4
3,159,697	+		PGA1_c30210	0.81	+0.2
3,159,699	+		PGA1_c30210	0.81	+1.5
3,159,774	-				+0.3
3,159,834	+				+0.6
3,159,839	-				-1.9
3,159,864	+				-0.4
3,159,878	-				+0.0
3,159,883	-				+0.1
3,159,910	+				+1.9
3,159,941	+				-0.7
3,159,956	+				-1.3
3,160,004	-		PGA1_c30220	0.15	+0.9
3,160,004	-		PGA1_c30220	0.15	-0.2
3,160,029	-		PGA1_c30220	0.17	-0.5
3,160,067	+		PGA1_c30220	0.21	-2.3
3,160,067	+		PGA1_c30220	0.21	+0.8
3,160,075	-		PGA1_c30220	0.22	-0.9
3,160,075	-		PGA1_c30220	0.22	-3.3
3,160,104	+		PGA1_c30220	0.25	+0.3
3,160,135	-		PGA1_c30220	0.28	-1.6
3,160,147	+		PGA1_c30220	0.29	-0.9
3,160,167	+		PGA1_c30220	0.31	-0.1
3,160,197	-		PGA1_c30220	0.34	+0.8
3,160,264	-		PGA1_c30220	0.41	-0.6
3,160,274	-		PGA1_c30220	0.42	-0.4
3,160,300	-		PGA1_c30220	0.44	-0.4
3,160,311	+		PGA1_c30220	0.45	+0.1
3,160,329	-		PGA1_c30220	0.47	-0.6
3,160,389	-		PGA1_c30220	0.53	-0.3
3,160,408	-		PGA1_c30220	0.55	+0.5
3,160,432	-		PGA1_c30220	0.57	+0.0
3,160,453	-		PGA1_c30220	0.59	-0.4
3,160,453	-		PGA1_c30220	0.59	+0.2
3,160,502	-		PGA1_c30220	0.64	+1.3
3,160,502	-		PGA1_c30220	0.64	-1.9
3,160,522	+		PGA1_c30220	0.66	+0.2
3,160,568	-		PGA1_c30220	0.71	-1.0
3,160,573	-		PGA1_c30220	0.71	-0.4
3,160,584	+		PGA1_c30220	0.72	-0.5
3,160,586	+		PGA1_c30220	0.73	-1.4
3,160,602	-		PGA1_c30220	0.74	+0.8
3,160,646	+		PGA1_c30220	0.79	+0.8
3,160,657	+		PGA1_c30220	0.80	+0.6
3,160,701	+		PGA1_c30220	0.84	-1.1
3,160,741	-		PGA1_c30220	0.88	-0.2
3,160,746	+		PGA1_c30220	0.89	-0.5
3,160,746	+		PGA1_c30220	0.89	+0.9
3,160,754	-		PGA1_c30220	0.89	-0.1
3,160,754	-		PGA1_c30220	0.89	-1.0
3,160,816	+				-0.3
3,160,816	+				+0.0
3,160,816	+				-1.2
3,160,824	-				-0.1
3,160,848	-				-0.1
3,160,862	-				-1.6
3,160,888	+				+1.5
3,160,896	-				+0.2
3,160,912	+				-1.4
3,160,912	+				-0.1
3,160,912	+				-1.7
3,160,912	+				-1.7
3,160,912	+				-0.6
3,160,920	-				-0.5
3,160,920	-				-1.4
3,160,920	-				+0.3
3,160,920	-				-0.7
3,160,920	-				+0.4
3,160,920	-				+0.4
3,160,927	+				-0.9
3,160,931	-				+0.5
3,160,935	+				+0.3
3,160,935	-				-2.6
3,160,954	+				+1.9
3,160,962	-				-1.3
3,160,962	-				-1.4
3,160,962	-				-0.8
3,160,970	+				-0.4
3,160,970	+				-1.9
3,160,983	-				-1.7
3,160,994	+				+0.5
3,160,994	+				-0.1
3,160,994	+				-0.1
3,160,994	+				-0.7
3,160,994	+				+0.1
3,160,994	+				+0.5
3,161,002	-				+0.1
3,161,008	+				-0.0
3,161,024	-				-1.3
3,161,032	-				-1.6
3,161,032	-				-0.7
3,161,032	-				+0.9
3,161,037	+				-0.8
3,161,037	+				-0.9
3,161,066	+				-0.5
3,161,074	-				+0.6
3,161,088	-				-1.7
3,161,089	+				+0.2
3,161,089	+				-0.6
3,161,097	-				+0.1
3,161,097	-				-0.0
3,161,097	-				+0.2
3,161,137	+				+0.9
3,161,151	-				-0.8
3,161,157	+				+0.4
3,161,164	-				+0.9
3,161,165	-				-1.6
3,161,180	+				-1.1
3,161,181	+				+0.3
3,161,181	+				-1.4
3,161,188	-				+0.7
3,161,189	-				+2.2
3,161,189	-				-0.7
3,161,189	-				-0.1
3,161,189	-				-2.7
3,161,189	-				-1.1
3,161,189	-				-0.1
3,161,192	+				+1.2
3,161,192	+				+0.6
3,161,192	+				+0.3
3,161,193	-				-0.5
3,161,194	-				+1.7
3,161,200	-				-1.1
3,161,206	+				-0.6
3,161,206	+				-0.5
3,161,206	+				-1.6
3,161,208	-				-0.9
3,161,214	-				+1.5
3,161,214	-				-1.8
3,161,214	-				+0.2
3,161,214	-				-1.4
3,161,214	-				-0.6
3,161,214	-				-1.0
3,161,240	-				+0.1
3,161,249	+				-0.4
3,161,257	-				-1.9
3,161,281	+				-0.3
3,161,297	+				-0.9
3,161,297	+				-0.3
3,161,297	+				-1.6
3,161,324	+				-0.1
3,161,343	-				+0.0
3,161,368	+		PGA1_c30230	0.10	-0.9
3,161,369	+		PGA1_c30230	0.10	-0.9
3,161,377	-		PGA1_c30230	0.11	-1.4
3,161,426	-		PGA1_c30230	0.13	+1.3
3,161,433	-		PGA1_c30230	0.14	-0.1
3,161,442	-		PGA1_c30230	0.14	-2.0
3,161,460	+		PGA1_c30230	0.15	-1.5
3,161,460	+		PGA1_c30230	0.15	-0.5
3,161,460	+		PGA1_c30230	0.15	-2.7
3,161,460	+		PGA1_c30230	0.15	-1.0
3,161,460	+		PGA1_c30230	0.15	-0.5
3,161,460	+		PGA1_c30230	0.15	-1.0
3,161,460	+		PGA1_c30230	0.15	-0.1
3,161,460	+		PGA1_c30230	0.15	-1.4
3,161,460	+		PGA1_c30230	0.15	-1.3
3,161,468	-		PGA1_c30230	0.16	-3.4
3,161,468	-		PGA1_c30230	0.16	-1.3
3,161,475	+		PGA1_c30230	0.16	-0.9
3,161,475	+		PGA1_c30230	0.16	-2.4
3,161,483	+		PGA1_c30230	0.17	+0.9
3,161,483	-		PGA1_c30230	0.17	+0.1
3,161,483	-		PGA1_c30230	0.17	-0.3
3,161,530	-		PGA1_c30230	0.19	+0.5
3,161,548	-		PGA1_c30230	0.20	+1.3
3,161,556	+		PGA1_c30230	0.20	-1.1
3,161,568	+		PGA1_c30230	0.21	-0.5
3,161,576	-		PGA1_c30230	0.21	-1.6
3,161,590	-		PGA1_c30230	0.22	+0.7
3,161,594	+		PGA1_c30230	0.22	-0.1
3,161,594	+		PGA1_c30230	0.22	-1.7
3,161,639	+		PGA1_c30230	0.25	+0.4
3,161,647	-		PGA1_c30230	0.25	-0.7
3,161,647	-		PGA1_c30230	0.25	-0.9
3,161,650	+		PGA1_c30230	0.25	-0.0
3,161,658	-		PGA1_c30230	0.26	+0.9
3,161,666	-		PGA1_c30230	0.26	+1.7
3,161,670	+		PGA1_c30230	0.26	-2.4
3,161,675	+		PGA1_c30230	0.27	+1.5
3,161,675	+		PGA1_c30230	0.27	-0.7
3,161,680	+		PGA1_c30230	0.27	-0.1
3,161,680	+		PGA1_c30230	0.27	-1.4
3,161,683	-		PGA1_c30230	0.27	-1.0
3,161,688	-		PGA1_c30230	0.27	-3.0
3,161,688	-		PGA1_c30230	0.27	+0.6
3,161,688	-		PGA1_c30230	0.27	-1.9
3,161,734	-		PGA1_c30230	0.30	+0.3
3,161,748	+		PGA1_c30230	0.31	-1.6
3,161,755	+		PGA1_c30230	0.31	+1.9
3,161,783	+		PGA1_c30230	0.33	-2.1
3,161,791	-		PGA1_c30230	0.33	-1.0
3,161,824	-		PGA1_c30230	0.35	-1.7
3,161,860	-		PGA1_c30230	0.37	-0.7