Experiment: m.b. Nickel (II) chloride 0.625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c15770 and PGA1_c15790 are separated by 145 nucleotides PGA1_c15790 and PGA1_c15800 are separated by 243 nucleotides
PGA1_c15770: PGA1_c15770 - putative phosphate transport system permease protein PstC, at 1,636,701 to 1,638,179
_c15770
PGA1_c15790: PGA1_c15790 - putative phosphate transporter, phosphate-binding protein, at 1,638,325 to 1,639,380
_c15790
PGA1_c15800: PGA1_c15800 - phosphate regulon sensor protein phoR-like protein, at 1,639,624 to 1,640,664
_c15800
Position (kb)
1638
1639
1640 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1637.368 kb on + strand, within PGA1_c15770 at 1637.391 kb on + strand, within PGA1_c15770 at 1637.391 kb on + strand, within PGA1_c15770 at 1637.397 kb on - strand, within PGA1_c15770 at 1637.399 kb on - strand, within PGA1_c15770 at 1637.404 kb on + strand, within PGA1_c15770 at 1637.422 kb on + strand, within PGA1_c15770 at 1637.490 kb on - strand, within PGA1_c15770 at 1637.530 kb on - strand, within PGA1_c15770 at 1637.555 kb on - strand, within PGA1_c15770 at 1637.714 kb on + strand, within PGA1_c15770 at 1637.729 kb on + strand, within PGA1_c15770 at 1637.734 kb on + strand, within PGA1_c15770 at 1637.756 kb on + strand, within PGA1_c15770 at 1637.764 kb on - strand, within PGA1_c15770 at 1637.823 kb on - strand, within PGA1_c15770 at 1637.837 kb on - strand, within PGA1_c15770 at 1637.875 kb on - strand, within PGA1_c15770 at 1637.882 kb on - strand, within PGA1_c15770 at 1638.069 kb on + strand at 1638.084 kb on - strand at 1638.111 kb on + strand at 1638.160 kb on - strand at 1638.180 kb on + strand at 1638.196 kb on - strand at 1638.246 kb on + strand at 1638.251 kb on + strand at 1638.251 kb on + strand at 1638.254 kb on - strand at 1638.259 kb on - strand at 1638.259 kb on - strand at 1638.305 kb on + strand at 1638.313 kb on - strand at 1638.348 kb on + strand at 1638.371 kb on + strand at 1638.371 kb on + strand at 1638.371 kb on + strand at 1638.379 kb on - strand at 1638.406 kb on - strand at 1638.407 kb on - strand at 1638.433 kb on - strand, within PGA1_c15790 at 1638.672 kb on - strand, within PGA1_c15790 at 1638.677 kb on - strand, within PGA1_c15790 at 1639.019 kb on + strand, within PGA1_c15790 at 1639.099 kb on + strand, within PGA1_c15790 at 1639.109 kb on + strand, within PGA1_c15790 at 1639.193 kb on - strand, within PGA1_c15790 at 1639.303 kb on - strand at 1639.345 kb on + strand at 1639.383 kb on - strand at 1639.438 kb on + strand at 1639.591 kb on - strand at 1639.598 kb on - strand at 1639.648 kb on + strand at 1639.726 kb on + strand at 1639.734 kb on - strand, within PGA1_c15800 at 1639.762 kb on + strand, within PGA1_c15800 at 1639.946 kb on - strand, within PGA1_c15800 at 1639.973 kb on + strand, within PGA1_c15800 at 1639.982 kb on + strand, within PGA1_c15800 at 1640.062 kb on + strand, within PGA1_c15800 at 1640.070 kb on - strand, within PGA1_c15800 at 1640.070 kb on - strand, within PGA1_c15800 at 1640.070 kb on - strand, within PGA1_c15800 at 1640.070 kb on - strand, within PGA1_c15800 at 1640.277 kb on + strand, within PGA1_c15800 at 1640.277 kb on + strand, within PGA1_c15800 at 1640.277 kb on + strand, within PGA1_c15800 at 1640.277 kb on + strand, within PGA1_c15800 at 1640.348 kb on + strand, within PGA1_c15800 at 1640.353 kb on + strand, within PGA1_c15800
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 0.625 mM remove 1,637,368 + PGA1_c15770 0.45 -1.4 1,637,391 + PGA1_c15770 0.47 +0.6 1,637,391 + PGA1_c15770 0.47 -2.0 1,637,397 - PGA1_c15770 0.47 +2.6 1,637,399 - PGA1_c15770 0.47 +0.0 1,637,404 + PGA1_c15770 0.48 +0.8 1,637,422 + PGA1_c15770 0.49 -0.4 1,637,490 - PGA1_c15770 0.53 -1.4 1,637,530 - PGA1_c15770 0.56 -2.1 1,637,555 - PGA1_c15770 0.58 +0.3 1,637,714 + PGA1_c15770 0.68 -0.2 1,637,729 + PGA1_c15770 0.70 -0.4 1,637,734 + PGA1_c15770 0.70 -0.6 1,637,756 + PGA1_c15770 0.71 +0.3 1,637,764 - PGA1_c15770 0.72 +0.4 1,637,823 - PGA1_c15770 0.76 -2.4 1,637,837 - PGA1_c15770 0.77 -1.3 1,637,875 - PGA1_c15770 0.79 -0.7 1,637,882 - PGA1_c15770 0.80 +0.2 1,638,069 + -0.0 1,638,084 - +0.3 1,638,111 + -0.4 1,638,160 - -2.0 1,638,180 + +2.0 1,638,196 - +0.2 1,638,246 + -1.7 1,638,251 + -1.1 1,638,251 + -1.4 1,638,254 - +0.1 1,638,259 - +0.4 1,638,259 - +1.2 1,638,305 + +0.1 1,638,313 - -1.8 1,638,348 + -2.4 1,638,371 + -0.1 1,638,371 + +1.4 1,638,371 + +0.9 1,638,379 - -0.6 1,638,406 - +0.8 1,638,407 - -0.6 1,638,433 - PGA1_c15790 0.10 +0.3 1,638,672 - PGA1_c15790 0.33 -0.1 1,638,677 - PGA1_c15790 0.33 -0.2 1,639,019 + PGA1_c15790 0.66 -2.2 1,639,099 + PGA1_c15790 0.73 -1.0 1,639,109 + PGA1_c15790 0.74 -1.0 1,639,193 - PGA1_c15790 0.82 +0.5 1,639,303 - +1.4 1,639,345 + -0.7 1,639,383 - +0.3 1,639,438 + +0.0 1,639,591 - +0.9 1,639,598 - +0.2 1,639,648 + -0.3 1,639,726 + -0.4 1,639,734 - PGA1_c15800 0.11 +0.6 1,639,762 + PGA1_c15800 0.13 -2.1 1,639,946 - PGA1_c15800 0.31 -0.4 1,639,973 + PGA1_c15800 0.34 -0.5 1,639,982 + PGA1_c15800 0.34 -0.2 1,640,062 + PGA1_c15800 0.42 -1.7 1,640,070 - PGA1_c15800 0.43 -0.8 1,640,070 - PGA1_c15800 0.43 -0.4 1,640,070 - PGA1_c15800 0.43 -0.4 1,640,070 - PGA1_c15800 0.43 -0.9 1,640,277 + PGA1_c15800 0.63 -0.2 1,640,277 + PGA1_c15800 0.63 +0.8 1,640,277 + PGA1_c15800 0.63 -0.4 1,640,277 + PGA1_c15800 0.63 -1.9 1,640,348 + PGA1_c15800 0.70 -0.4 1,640,353 + PGA1_c15800 0.70 -0.5
Or see this region's nucleotide sequence