Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_4160
Experiment: m.b. Chloramphenicol 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Chloramphenicol 0.0002 mg/ml |
---|---|---|---|---|---|
remove | |||||
7,129 | + | Dshi_4159 | 0.50 | +0.4 | |
7,147 | - | Dshi_4159 | 0.51 | +0.6 | |
7,667 | - | -3.0 | |||
7,682 | - | -1.0 | |||
7,706 | + | -0.9 | |||
8,007 | + | Dshi_4160 | 0.30 | -0.1 | |
8,035 | + | Dshi_4160 | 0.33 | +1.2 | |
8,095 | - | Dshi_4160 | 0.39 | -2.0 | |
8,257 | + | Dshi_4160 | 0.55 | -1.4 | |
8,575 | - | Dshi_4160 | 0.87 | -2.5 | |
8,580 | - | Dshi_4160 | 0.88 | -2.2 | |
8,590 | - | Dshi_4160 | 0.89 | -1.2 | |
8,656 | - | +2.5 | |||
8,656 | - | -1.7 | |||
8,656 | - | -2.5 | |||
8,695 | - | -0.4 | |||
8,709 | + | -1.4 | |||
9,392 | + | Dshi_4161 | 0.60 | +1.9 | |
9,460 | - | Dshi_4161 | 0.69 | +0.6 |
Or see this region's nucleotide sequence