Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_4118
Experiment: m.b. Chloramphenicol 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Chloramphenicol 0.0002 mg/ml |
---|---|---|---|---|---|
remove | |||||
48,879 | - | +1.1 | |||
49,199 | + | Dshi_4117 | 0.40 | +3.8 | |
49,279 | + | Dshi_4117 | 0.50 | +3.3 | |
49,350 | + | Dshi_4117 | 0.58 | +1.3 | |
49,485 | + | Dshi_4117 | 0.74 | -0.2 | |
49,791 | + | -1.5 | |||
49,799 | - | -1.8 | |||
49,834 | + | Dshi_4118 | 0.10 | -1.2 | |
50,053 | + | Dshi_4118 | 0.35 | +0.2 | |
50,073 | - | Dshi_4118 | 0.38 | +0.5 | |
50,098 | - | Dshi_4118 | 0.41 | +1.3 | |
50,154 | - | Dshi_4118 | 0.47 | -3.4 | |
50,191 | + | Dshi_4118 | 0.51 | -0.4 | |
50,311 | + | Dshi_4118 | 0.65 | +2.5 | |
50,323 | + | Dshi_4118 | 0.66 | +1.0 | |
50,350 | + | Dshi_4118 | 0.69 | +1.5 | |
50,501 | + | Dshi_4118 | 0.87 | -1.8 | |
50,563 | - | +0.8 | |||
50,594 | + | +2.5 | |||
50,672 | + | -0.5 | |||
50,680 | - | -0.1 | |||
50,701 | - | +1.4 | |||
50,766 | + | -2.5 | |||
51,188 | + | Dshi_4119 | 0.50 | -1.7 | |
51,189 | + | Dshi_4119 | 0.50 | +0.5 | |
51,375 | + | Dshi_4119 | 0.71 | +1.8 | |
51,375 | + | Dshi_4119 | 0.71 | -0.2 |
Or see this region's nucleotide sequence