Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_4116
Experiment: m.b. Chloramphenicol 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Chloramphenicol 0.0002 mg/ml |
---|---|---|---|---|---|
remove | |||||
47,071 | + | -0.4 | |||
47,312 | + | Dshi_4115 | 0.32 | -2.2 | |
47,312 | + | Dshi_4115 | 0.32 | -0.1 | |
47,312 | + | Dshi_4115 | 0.32 | -1.1 | |
47,320 | - | Dshi_4115 | 0.33 | -1.8 | |
47,406 | - | Dshi_4115 | 0.41 | +3.5 | |
47,548 | - | Dshi_4115 | 0.55 | -3.1 | |
47,584 | - | Dshi_4115 | 0.58 | +1.8 | |
47,584 | - | Dshi_4115 | 0.58 | -3.3 | |
47,607 | + | Dshi_4115 | 0.60 | +0.5 | |
47,670 | + | Dshi_4115 | 0.66 | +2.7 | |
47,757 | - | Dshi_4115 | 0.75 | -0.4 | |
47,796 | + | Dshi_4115 | 0.79 | +0.5 | |
47,979 | - | +3.8 | |||
48,194 | + | Dshi_4116 | 0.21 | -2.9 | |
48,296 | - | Dshi_4116 | 0.33 | -0.5 | |
48,427 | + | Dshi_4116 | 0.49 | +2.5 | |
48,526 | + | Dshi_4116 | 0.60 | -0.4 | |
48,592 | + | Dshi_4116 | 0.68 | +0.1 | |
48,627 | + | Dshi_4116 | 0.73 | +0.5 | |
48,879 | - | +1.1 | |||
49,199 | + | Dshi_4117 | 0.40 | +3.8 | |
49,279 | + | Dshi_4117 | 0.50 | +3.3 | |
49,350 | + | Dshi_4117 | 0.58 | +1.3 | |
49,485 | + | Dshi_4117 | 0.74 | -0.2 | |
49,791 | + | -1.5 | |||
49,799 | - | -1.8 | |||
49,834 | + | Dshi_4118 | 0.10 | -1.2 |
Or see this region's nucleotide sequence