Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_4011

Experiment: m.b. Chloramphenicol 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.0002 mg/ml
78,361	+				-0.7
78,361	+				-0.4
78,364	+				-1.0
78,366	+				-1.0
78,369	+				+1.0
78,369	-				+0.1
78,378	+				-1.9
78,378	-				-1.2
78,383	+				-0.7
78,383	+				-0.9
78,383	-				-1.3
78,391	-				-3.8
78,393	-		Dshi_4010	0.10	-0.2
78,393	-		Dshi_4010	0.10	-0.9
78,416	-		Dshi_4010	0.13	+0.2
78,421	+		Dshi_4010	0.14	-0.2
78,422	+		Dshi_4010	0.14	-0.4
78,423	-		Dshi_4010	0.14	-3.3
78,423	-		Dshi_4010	0.14	+0.2
78,427	+		Dshi_4010	0.15	+0.9
78,434	+		Dshi_4010	0.16	-0.8
78,444	+		Dshi_4010	0.17	-2.1
78,448	-		Dshi_4010	0.18	+1.3
78,448	-		Dshi_4010	0.18	-0.1
78,453	-		Dshi_4010	0.18	-1.5
78,453	-		Dshi_4010	0.18	+0.6
78,477	-		Dshi_4010	0.22	-0.2
78,504	-		Dshi_4010	0.26	+0.1
78,504	-		Dshi_4010	0.26	-1.2
78,504	-		Dshi_4010	0.26	+0.4
78,508	-		Dshi_4010	0.26	-0.7
78,514	+		Dshi_4010	0.27	-0.1
78,522	-		Dshi_4010	0.28	-0.6
78,522	-		Dshi_4010	0.28	-2.3
78,522	-		Dshi_4010	0.28	-1.1
78,524	+		Dshi_4010	0.28	-0.7
78,541	-		Dshi_4010	0.31	-0.7
78,614	+		Dshi_4010	0.41	-1.3
78,640	+		Dshi_4010	0.44	-1.3
78,640	+		Dshi_4010	0.44	+1.5
78,649	+		Dshi_4010	0.46	+0.1
78,650	+		Dshi_4010	0.46	-0.3
78,651	+		Dshi_4010	0.46	-2.8
78,663	-		Dshi_4010	0.48	-4.0
78,692	-		Dshi_4010	0.52	-0.1
78,721	+		Dshi_4010	0.56	-1.1
78,724	-		Dshi_4010	0.56	-1.2
78,729	-		Dshi_4010	0.57	+1.0
78,753	-		Dshi_4010	0.60	-0.0
78,756	+		Dshi_4010	0.61	+0.6
78,761	+		Dshi_4010	0.61	+0.2
78,761	+		Dshi_4010	0.61	+1.0
78,761	+		Dshi_4010	0.61	-0.8
78,766	+		Dshi_4010	0.62	-0.7
78,769	-		Dshi_4010	0.62	+0.1
78,788	+		Dshi_4010	0.65	+1.6
78,804	-		Dshi_4010	0.67	+1.0
78,806	+		Dshi_4010	0.68	-4.2
78,814	-		Dshi_4010	0.69	+0.2
78,825	-		Dshi_4010	0.70	-0.7
78,841	+		Dshi_4010	0.72	-1.1
78,841	+		Dshi_4010	0.72	-1.0
78,849	-		Dshi_4010	0.73	-0.5
78,849	-		Dshi_4010	0.73	+2.2
78,849	-		Dshi_4010	0.73	-1.7
78,851	+		Dshi_4010	0.74	+0.3
78,946	+		Dshi_4010	0.87	-2.0
78,985	+				-1.0
79,001	-				-0.5
79,005	-				-0.6
79,046	-				-0.7
79,048	+				-0.8
79,048	+				-1.7
79,052	+				+0.8
79,052	+				-0.5
79,053	+				-1.1
79,053	+				+0.6
79,077	-				-2.3
79,106	-				-2.0
79,117	-				-1.5
79,121	-				+0.3
79,141	+				-2.6
79,153	+				-1.6
79,159	+				-0.7
79,161	+				-1.3
79,196	-				-1.5
79,197	+				-1.0
79,198	+				-0.5
79,204	-				-1.4
79,215	-				-1.4
79,273	+				-0.0
79,281	-				-4.0
79,320	+				-0.8
79,320	+				+0.3
79,320	+				-1.8
79,328	-				-0.1
79,328	-				-1.0
79,328	-				-1.7
79,368	-				+0.0
79,377	+				-0.2
79,385	-				-0.2
79,385	-				-2.1
79,389	+				-0.9
79,427	-		Dshi_4011	0.13	+0.1
79,449	+		Dshi_4011	0.17	-1.8
79,457	-		Dshi_4011	0.18	+1.0
79,470	+		Dshi_4011	0.21	-0.0
79,470	+		Dshi_4011	0.21	+1.9
79,478	-		Dshi_4011	0.23	-0.1
79,478	-		Dshi_4011	0.23	+0.1
79,478	-		Dshi_4011	0.23	-2.4
79,503	-		Dshi_4011	0.27	-2.3
79,538	+		Dshi_4011	0.34	-1.2
79,580	-		Dshi_4011	0.42	-1.3
79,618	-		Dshi_4011	0.50	-0.5
79,618	-		Dshi_4011	0.50	-2.3
79,677	+		Dshi_4011	0.61	-1.5
79,686	+		Dshi_4011	0.63	-1.1
79,695	+		Dshi_4011	0.64	-0.2
79,750	-		Dshi_4011	0.75	+0.9
79,750	-		Dshi_4011	0.75	-1.4
79,793	-		Dshi_4011	0.83	-0.5
79,864	+				-1.8
79,864	+				-1.3
79,872	-				+2.5
79,885	-				+2.2
79,945	+		Dshi_4012	0.21	+0.9
79,968	+		Dshi_4012	0.28	-1.1
80,057	+		Dshi_4012	0.55	-1.4
80,071	-		Dshi_4012	0.60	-0.6
80,116	-		Dshi_4012	0.73	-1.8
80,120	-		Dshi_4012	0.75	-0.8
80,135	-		Dshi_4012	0.79	+0.6
80,313	-				-0.6
80,323	-				+1.5
80,358	+				-0.6
80,392	-				-1.1
80,397	-		Dshi_4013	0.10	-1.7
80,402	-		Dshi_4013	0.11	-0.5
80,403	-		Dshi_4013	0.11	+0.7
80,403	-		Dshi_4013	0.11	-0.1
80,453	-		Dshi_4013	0.19	-0.2
80,475	+		Dshi_4013	0.22	-1.9
80,480	+		Dshi_4013	0.23	-0.3
80,485	+		Dshi_4013	0.24	-1.2
80,572	+		Dshi_4013	0.37	-0.8
80,690	-		Dshi_4013	0.55	-2.0
80,723	-		Dshi_4013	0.60	+0.0
80,802	+		Dshi_4013	0.72	+0.0
80,846	-		Dshi_4013	0.79	+0.1
80,848	-		Dshi_4013	0.79	-1.3
80,858	+		Dshi_4013	0.81	-1.0
80,867	+		Dshi_4013	0.82	-1.7
80,867	+		Dshi_4013	0.82	-0.5
80,867	+		Dshi_4013	0.82	-0.8
80,875	-		Dshi_4013	0.83	-1.4
80,875	-		Dshi_4013	0.83	-0.7
80,875	-		Dshi_4013	0.83	-1.0
80,877	+		Dshi_4013	0.84	-3.0