Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3970

Experiment: m.b. Chloramphenicol 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.0002 mg/ml
31,401	-		Dshi_3968	0.61	-1.2
31,407	-		Dshi_3968	0.61	-0.4
31,420	+		Dshi_3968	0.63	-0.1
31,433	-		Dshi_3968	0.64	-3.9
31,434	-		Dshi_3968	0.64	+0.4
31,458	+		Dshi_3968	0.67	+0.7
31,523	+		Dshi_3968	0.75	-1.1
31,531	-		Dshi_3968	0.76	-1.8
31,531	-		Dshi_3968	0.76	-0.5
31,538	-		Dshi_3968	0.77	+0.1
31,622	+		Dshi_3968	0.87	+0.5
31,622	+		Dshi_3968	0.87	+2.5
31,636	+		Dshi_3968	0.88	+0.3
31,644	-		Dshi_3968	0.89	-0.4
31,644	-		Dshi_3968	0.89	-1.0
31,721	+				+1.4
31,721	+				+1.0
31,745	-				+0.5
31,888	-				+4.2
31,921	-		Dshi_3969	0.11	+0.6
31,992	+		Dshi_3969	0.42	-0.3
31,997	+		Dshi_3969	0.44	-1.7
32,000	-		Dshi_3969	0.45	-1.2
32,015	-		Dshi_3969	0.52	+0.9
32,017	-		Dshi_3969	0.53	-1.3
32,017	-		Dshi_3969	0.53	-0.8
32,017	-		Dshi_3969	0.53	-1.0
32,017	-		Dshi_3969	0.53	-0.3
32,017	-		Dshi_3969	0.53	+1.0
32,017	-		Dshi_3969	0.53	-0.2
32,033	-		Dshi_3969	0.60	-0.1
32,068	-		Dshi_3969	0.75	-1.4
32,070	+		Dshi_3969	0.76	-0.3
32,078	-		Dshi_3969	0.79	+1.5
32,084	+		Dshi_3969	0.82	-0.5
32,089	+		Dshi_3969	0.84	+0.8
32,102	+				-0.5
32,108	+				+1.5
32,116	-				+1.8
32,135	+				+0.1
32,162	-				+0.2
32,185	-				+0.1
32,192	+				-0.6
32,242	+				-0.0
32,242	+				+0.8
32,261	-				-1.3
32,310	+				-1.7
32,318	-		Dshi_3970	0.10	-0.2
32,318	-		Dshi_3970	0.10	-1.1
32,318	-		Dshi_3970	0.10	-1.3
32,318	-		Dshi_3970	0.10	-0.1
32,364	-		Dshi_3970	0.28	-0.3
32,367	+		Dshi_3970	0.29	-0.4
32,367	+		Dshi_3970	0.29	+1.1
32,367	+		Dshi_3970	0.29	+0.3
32,367	+		Dshi_3970	0.29	-0.9
32,367	+		Dshi_3970	0.29	+0.2
32,367	+		Dshi_3970	0.29	+0.9
32,367	+		Dshi_3970	0.29	-0.4
32,375	-		Dshi_3970	0.32	-0.2
32,375	-		Dshi_3970	0.32	-0.1
32,375	-		Dshi_3970	0.32	-0.4
32,375	-		Dshi_3970	0.32	+0.3
32,375	-		Dshi_3970	0.32	+1.4
32,375	-		Dshi_3970	0.32	+0.0
32,375	-		Dshi_3970	0.32	+1.0
32,382	-		Dshi_3970	0.35	+1.9
32,382	-		Dshi_3970	0.35	+1.2
32,433	-		Dshi_3970	0.55	-0.7
32,469	+		Dshi_3970	0.69	-0.4
32,469	+		Dshi_3970	0.69	-0.2
32,476	-		Dshi_3970	0.71	-0.3
32,486	+		Dshi_3970	0.75	-0.5
32,489	-		Dshi_3970	0.76	+1.6
32,489	-		Dshi_3970	0.76	-0.4
32,642	+				+0.7
32,644	+				-0.3
32,652	-				-1.5
32,652	-				+0.2
32,652	-				-1.1
32,664	-				+0.2
32,686	-				+2.2
32,730	+		Dshi_3971	0.17	-0.0
32,730	+		Dshi_3971	0.17	+3.0
32,738	-		Dshi_3971	0.20	+0.2
32,749	+		Dshi_3971	0.23	+2.4
32,762	-		Dshi_3971	0.27	-1.4
32,762	-		Dshi_3971	0.27	-3.0
32,762	-		Dshi_3971	0.27	-1.7
32,789	+		Dshi_3971	0.36	-0.2
32,861	+		Dshi_3971	0.58	+3.6
32,876	+		Dshi_3971	0.63	-0.1
32,886	+		Dshi_3971	0.66	+1.6
32,899	-		Dshi_3971	0.70	-0.4
32,944	-		Dshi_3971	0.84	+1.3
32,953	-		Dshi_3971	0.87	+0.8
32,953	-		Dshi_3971	0.87	+0.2
33,001	+				-0.2
33,009	-				-1.3
33,016	-				+0.9
33,016	-				+0.2
33,098	+				+0.1
33,105	+				-0.7
33,114	+				-0.5
33,143	-				-0.7
33,214	+		Dshi_3972	0.21	-1.0
33,249	+		Dshi_3972	0.31	-0.4
33,266	+		Dshi_3972	0.36	-0.8
33,273	-		Dshi_3972	0.38	-0.3
33,384	+		Dshi_3972	0.69	+0.2
33,388	+		Dshi_3972	0.71	-4.9
33,388	+		Dshi_3972	0.71	-1.2
33,414	-		Dshi_3972	0.78	-0.0
33,441	-		Dshi_3972	0.86	-0.9
33,476	+				+2.0
33,481	+				-3.4
33,484	-				-0.8
33,499	-				+0.5
33,538	+				+0.5
33,543	+				+1.7