Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3913

Experiment: m.b. Chloramphenicol 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.0002 mg/ml
140,460	-				+2.3
140,470	-				+2.3
140,471	-				+0.4
140,471	-				+0.5
140,499	+				+0.6
140,514	-				-3.5
140,631	-				+1.0
140,631	-				-2.4
140,694	+				+0.4
140,738	+				+0.2
140,739	+				-0.6
140,749	-				+2.0
140,750	-				-3.0
140,760	-				+0.4
140,772	-				+0.4
140,794	-				-1.1
140,794	-				+0.5
140,798	+				+0.9
140,815	-				+0.4
140,820	+				-0.7
140,826	-				-2.5
140,858	-		Dshi_3912	0.16	+0.9
140,858	-		Dshi_3912	0.16	-1.8
140,887	+				+2.0
140,980	+		Dshi_3912	0.42	-1.4
141,001	+		Dshi_3912	0.46	-0.5
141,017	-		Dshi_3912	0.49	-1.1
141,019	+		Dshi_3912	0.50	+0.0
141,128	+		Dshi_3912	0.72	-0.0
141,164	+		Dshi_3912	0.80	+1.0
141,165	+				+1.0
141,224	-				+0.9
141,224	-				-1.5
141,226	+				-0.7
141,311	+				+1.0
141,337	+				+0.4
141,345	-				-0.6
141,402	+				-3.5
141,402	+				-1.9
141,409	-				+2.0
141,410	-				-0.5
141,458	-				+0.0
141,496	-				-1.5
141,531	+		Dshi_3913	0.12	+3.0
141,531	+		Dshi_3913	0.12	-1.9
141,531	+		Dshi_3913	0.12	+1.8
141,576	+		Dshi_3913	0.19	-2.0
141,589	-		Dshi_3913	0.21	-0.6
141,602	+		Dshi_3913	0.23	-0.2
141,602	-		Dshi_3913	0.23	-2.0
141,716	+		Dshi_3913	0.40	+0.1
141,726	+		Dshi_3913	0.42	-0.3
141,740	-		Dshi_3913	0.44	-2.0
141,789	+		Dshi_3913	0.51	+0.3
141,792	-		Dshi_3913	0.52	-3.0
141,795	+		Dshi_3913	0.52	-0.3
141,800	+		Dshi_3913	0.53	-1.6
141,854	+		Dshi_3913	0.61	+0.8
141,933	+		Dshi_3913	0.73	-0.9
142,035	+		Dshi_3913	0.88	-1.2
142,196	+				+1.0
142,196	+				+0.1
142,196	+				+0.1
142,204	-				-0.0
142,238	+				-1.6
142,240	-				-2.0
142,248	-				+0.8
142,274	+		Dshi_3914	0.11	+0.5
142,371	-		Dshi_3914	0.17	-1.5
142,411	-		Dshi_3914	0.20	+2.5
142,493	+		Dshi_3914	0.26	-0.9
142,618	-		Dshi_3914	0.34	+2.5
142,625	+		Dshi_3914	0.34	-0.4
142,650	+		Dshi_3914	0.36	-1.3
142,658	-		Dshi_3914	0.37	-1.4
142,764	-		Dshi_3914	0.44	+0.2
142,779	-		Dshi_3914	0.45	+0.3
142,813	-		Dshi_3914	0.47	+1.0
142,820	+		Dshi_3914	0.48	-2.4
142,828	-		Dshi_3914	0.48	+0.1
142,918	+		Dshi_3914	0.54	+0.1
142,930	+		Dshi_3914	0.55	+0.1
142,967	+		Dshi_3914	0.58	+1.1
142,975	-		Dshi_3914	0.58	+0.8
143,053	+		Dshi_3914	0.63	-0.6
143,053	+		Dshi_3914	0.63	+0.9
143,065	-		Dshi_3914	0.64	+0.1
143,103	+		Dshi_3914	0.67	+2.0