Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3855

Experiment: m.b. Chloramphenicol 0.0002 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDshi_3854 and Dshi_3855 are separated by 378 nucleotidesDshi_3855 and Dshi_3856 are separated by 122 nucleotides Dshi_3854: Dshi_3854 - RepA (RefSeq), at 59,311 to 60,357 _3854 Dshi_3855: Dshi_3855 - Cobyrinic acid ac-diamide synthase (RefSeq), at 60,736 to 62,127 _3855 Dshi_3856: Dshi_3856 - ParB domain protein nuclease (RefSeq), at 62,250 to 63,425 _3856 Position (kb) 60 61 62 63Strain fitness (log2 ratio) -2 -1 0 1at 60.585 kb on - strandat 60.618 kb on - strandat 60.618 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chloramphenicol 0.0002 mg/ml
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60,585 - -1.9
60,618 - -2.0
60,618 - -2.2

Or see this region's nucleotide sequence