Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3801

Experiment: m.b. Chloramphenicol 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.0002 mg/ml
7,393	+		Dshi_3799	0.52	+0.4
7,633	-				-0.6
7,690	-				-1.9
7,874	-		Dshi_3800	0.31	+3.3
8,039	+		Dshi_3800	0.58	-2.6
8,043	+		Dshi_3800	0.58	-2.6
8,238	-				-0.6
8,377	-				-2.6
8,457	-				+1.4
8,515	+				-2.0
8,599	-		Dshi_3801	0.11	+1.0
8,612	+		Dshi_3801	0.12	-0.0
8,890	+		Dshi_3801	0.24	-1.9
9,092	+		Dshi_3801	0.34	+2.2
9,100	-		Dshi_3801	0.34	+1.1
9,100	-		Dshi_3801	0.34	+1.0
9,169	+		Dshi_3801	0.37	+3.0
9,169	+		Dshi_3801	0.37	-3.4
9,229	-		Dshi_3801	0.40	-1.4
9,234	-		Dshi_3801	0.40	-0.6
9,264	-		Dshi_3801	0.42	-0.6
9,421	-		Dshi_3801	0.49	+0.7
9,502	+		Dshi_3801	0.53	-0.4
9,537	-		Dshi_3801	0.54	-1.8
9,572	+		Dshi_3801	0.56	+1.1
9,579	+		Dshi_3801	0.56	+1.6
9,613	+		Dshi_3801	0.58	+1.7
9,755	-		Dshi_3801	0.64	+1.0
9,814	+		Dshi_3801	0.67	-0.8
9,843	-		Dshi_3801	0.68	-1.8
9,845	-		Dshi_3801	0.68	-2.2
9,861	+		Dshi_3801	0.69	+0.6
9,861	+				+1.0
9,861	+		Dshi_3801	0.69	-1.0
9,864	-		Dshi_3801	0.69	+1.8
9,869	-		Dshi_3801	0.69	+1.0
10,114	+		Dshi_3801	0.81	-1.0
10,164	-		Dshi_3801	0.83	+1.1
10,167	-		Dshi_3801	0.83	-3.0
10,185	-		Dshi_3801	0.84	+0.2
10,264	+		Dshi_3801	0.88	-0.0
10,270	-		Dshi_3801	0.88	+0.6
10,272	-		Dshi_3801	0.88	-2.2
10,414	-				+0.4
10,415	+				-1.4
10,547	-				-2.4
10,585	+				+3.5
10,589	-				-0.6
10,670	-				-1.6
10,678	-				-1.4
10,696	-				+0.1
10,799	+		Dshi_3802	0.16	+1.0
10,833	+		Dshi_3802	0.20	+0.3
10,975	+		Dshi_3802	0.35	+5.0
10,992	+		Dshi_3802	0.37	+1.0
11,090	+		Dshi_3802	0.47	+2.0
11,205	+		Dshi_3802	0.60	-1.0
11,223	-		Dshi_3802	0.62	+1.0
11,260	+		Dshi_3802	0.66	+0.4
11,269	-		Dshi_3802	0.67	-1.6
11,321	+		Dshi_3802	0.72	-0.4
11,329	-		Dshi_3802	0.73	-0.5
11,358	-		Dshi_3802	0.76	+1.2
11,397	-		Dshi_3802	0.80	-2.5
11,516	-				-0.5