Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3729

Experiment: m.b. Chloramphenicol 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.0002 mg/ml
135,696	-		Dshi_3728	0.79	+1.8
135,797	+				-1.6
135,801	+				-0.1
135,824	-				+0.3
135,845	+				+0.1
135,853	-				-0.8
135,853	-				-1.7
135,878	+				-1.6
135,879	-				-0.5
135,887	-				-0.6
135,887	-				+3.3
135,889	+				-1.9
135,889	+				-1.6
135,889	+				+0.3
135,889	+				-0.2
135,897	-				+0.4
135,897	-				-1.2
135,897	-				-1.1
135,897	-				+1.5
135,897	-				-3.2
135,897	-				-0.7
135,956	+				+0.9
135,966	+				+0.8
135,966	-				-0.9
135,969	-				+1.0
135,998	+				+0.4
136,004	+				-1.3
136,007	-				+2.8
136,035	-				-0.9
136,059	+				+0.6
136,071	+				-2.9
136,077	+				+1.8
136,077	+				-2.9
136,077	+				+1.0
136,079	-				-0.2
136,092	-				-2.0
136,098	+				+0.2
136,100	-				-1.6
136,126	-				+1.4
136,126	-				-2.7
136,157	-				-2.2
136,157	-				+0.3
136,167	-				+0.8
136,167	-				-2.9
136,184	-				-0.1
136,191	+				-0.2
136,191	+				+0.4
136,191	+				-0.4
136,191	+				-0.9
136,191	+				+0.9
136,191	+				+0.3
136,191	+				-1.2
136,191	+				+3.4
136,191	+				-0.3
136,193	+				+0.2
136,199	-				-2.1
136,199	-				-0.5
136,199	-				-0.2
136,199	-				-3.7
136,199	-				+1.3
136,199	-				-0.1
136,201	-				+0.5
136,206	+				-0.8
136,250	+				-1.6
136,289	+				-0.2
136,296	-				-0.6
136,318	-				-0.4
136,318	-				-0.7
136,337	-				-1.1
136,346	+				-1.3
136,390	+				-1.2
136,429	+				+1.6
136,435	+				-0.3
136,435	+				-0.2
136,435	+				-1.2
136,443	-				+1.8
136,443	-				-0.1
136,445	+				-2.2
136,448	-				-0.6
136,459	-				-0.2
136,459	-				-0.4
136,461	-				+0.9
136,461	-				+3.0
136,462	+				-0.7
136,470	-				-0.7
136,487	+				-0.5
136,488	+				-0.4
136,488	-				-0.5
136,490	+				-1.9
136,492	+				-0.4
136,495	-				+1.2
136,495	-				-1.2
136,495	-				+0.1
136,496	-				-4.1
136,498	-				-1.6
136,498	-				-0.7
136,499	+				-1.8
136,502	-				-0.0
136,507	-				-0.2
136,507	-				+0.0
136,508	-				-0.5
136,508	-				-3.9
136,525	-				-0.5
136,531	+				+0.2
136,565	+				+3.2
136,565	+				-1.5
136,565	+				+0.4
136,565	+				-1.4
136,565	+				+1.3
136,565	+				-0.6
136,565	+				-1.0
136,565	+				-0.6
136,572	+				+0.0
136,572	+				-4.2
136,573	-				-0.2
136,573	-				+0.6
136,573	-				-0.6
136,596	+				-1.1
136,613	-				-0.0
136,618	-				-0.6
136,623	-				-0.9
136,624	+				-3.0
136,628	+				-0.6
136,628	+				-0.6
136,682	-				-0.7
136,715	+		Dshi_3729	0.11	+0.4
136,723	-		Dshi_3729	0.13	+1.2
136,723	-		Dshi_3729	0.13	+0.3
136,766	+		Dshi_3729	0.21	+2.0
136,766	+		Dshi_3729	0.21	-1.4
136,774	-		Dshi_3729	0.23	+0.4
136,774	-		Dshi_3729	0.23	+0.7
136,774	-		Dshi_3729	0.23	-4.8
136,797	-		Dshi_3729	0.27	+0.1
136,846	+		Dshi_3729	0.36	-2.2
136,848	+		Dshi_3729	0.37	-0.9
136,939	+		Dshi_3729	0.54	+0.4
136,992	+		Dshi_3729	0.65	-0.1
137,036	-		Dshi_3729	0.73	-0.5
137,041	-		Dshi_3729	0.74	-2.1
137,076	+		Dshi_3729	0.81	+0.6
137,077	-		Dshi_3729	0.81	-2.5
137,084	-		Dshi_3729	0.82	-0.3
137,102	-		Dshi_3729	0.86	-2.2
137,131	+				-0.2
137,160	+				-0.5
137,160	+				-1.4
137,160	+				+0.6
137,160	+				-0.2
137,160	+				-0.1
137,160	+				+1.2
137,160	+				+0.4
137,168	-				+2.6
137,168	-				-2.9
137,168	-				+0.1
137,168	-				+0.8
137,172	-				+0.2
137,173	-				-2.0
137,223	+		Dshi_3730	0.16	+1.6
137,353	+		Dshi_3730	0.55	+0.1
137,421	-		Dshi_3730	0.76	-1.8
137,421	-		Dshi_3730	0.76	-0.5
137,421	-		Dshi_3730	0.76	-0.1
137,602	-				+0.4
137,609	-				-0.2
137,611	+				-2.2
137,611	+				-2.3
137,638	+				-0.8
137,654	+				-1.2
137,665	+				-0.3
137,776	+		Dshi_3731	0.23	-0.6
137,828	+		Dshi_3731	0.31	-0.3
137,876	-		Dshi_3731	0.38	-1.6
137,902	+		Dshi_3731	0.42	+0.4
137,902	+		Dshi_3731	0.42	-0.6
137,910	-		Dshi_3731	0.44	+0.6
137,940	+		Dshi_3731	0.48	+2.2
137,958	+		Dshi_3731	0.51	-0.2
137,966	-		Dshi_3731	0.52	-0.4
137,966	-		Dshi_3731	0.52	-1.0
137,973	+		Dshi_3731	0.53	-1.9
137,992	-		Dshi_3731	0.56	-0.7
138,047	-		Dshi_3731	0.65	-0.9
138,050	+		Dshi_3731	0.65	-0.1
138,057	-		Dshi_3731	0.66	-0.4
138,083	+				-0.6
138,106	-		Dshi_3731	0.74	-0.3
138,140	+		Dshi_3731	0.79	-1.7
138,171	-		Dshi_3731	0.83	-0.3