Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3711

Experiment: m.b. Chloramphenicol 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.0002 mg/ml
115,504	-		Dshi_3709	0.71	-1.0
115,590	+		Dshi_3709	0.78	-0.6
115,595	+		Dshi_3709	0.78	-0.8
115,608	-		Dshi_3709	0.79	-0.3
115,699	-		Dshi_3709	0.86	-1.4
115,764	-				-1.8
115,765	-				-2.2
115,765	-				-0.2
115,784	+				+1.2
115,851	+				+0.6
115,891	-				-3.7
115,891	-				-1.1
115,899	-				-0.1
115,917	+				-0.6
116,023	-		Dshi_3710	0.26	-2.6
116,023	-		Dshi_3710	0.26	-1.2
116,081	-		Dshi_3710	0.37	-0.3
116,088	+		Dshi_3710	0.38	+0.0
116,110	-		Dshi_3710	0.42	+0.8
116,112	+		Dshi_3710	0.42	-0.6
116,120	-		Dshi_3710	0.44	+0.3
116,169	+		Dshi_3710	0.52	-4.6
116,169	+		Dshi_3710	0.52	-1.8
116,186	+		Dshi_3710	0.55	+1.3
116,186	+		Dshi_3710	0.55	+0.0
116,279	-		Dshi_3710	0.71	-2.9
116,305	+				+4.0
116,305	+		Dshi_3710	0.76	-3.2
116,305	+		Dshi_3710	0.76	-1.0
116,305	+		Dshi_3710	0.76	+0.4
116,313	-		Dshi_3710	0.77	+1.3
116,313	-		Dshi_3710	0.77	+0.5
116,313	-		Dshi_3710	0.77	-0.5
116,313	-		Dshi_3710	0.77	-0.2
116,360	-		Dshi_3710	0.86	+0.3
116,408	-				-0.1
116,432	+				-2.1
116,440	-				+1.1
116,514	-				-0.7
116,553	-				+0.2
116,563	-				-0.8
116,563	-				+0.4
116,563	-				+0.1
116,568	-				-1.0
116,601	+		Dshi_3711	0.10	-1.0
116,616	+		Dshi_3711	0.12	+0.4
116,616	+		Dshi_3711	0.12	+0.1
116,691	+		Dshi_3711	0.19	+2.8
116,694	-		Dshi_3711	0.19	-1.3
116,734	+		Dshi_3711	0.24	-2.1
116,867	-		Dshi_3711	0.37	-0.8
116,918	-		Dshi_3711	0.42	-0.2
116,957	+		Dshi_3711	0.46	-1.3
116,957	+		Dshi_3711	0.46	-1.6
116,966	+		Dshi_3711	0.47	-0.3
116,975	-		Dshi_3711	0.48	-1.1
116,980	+		Dshi_3711	0.49	-0.4
116,987	-		Dshi_3711	0.49	-0.1
116,988	+		Dshi_3711	0.49	-1.7
117,095	+		Dshi_3711	0.60	-0.3
117,160	-		Dshi_3711	0.67	-1.4
117,161	+		Dshi_3711	0.67	-1.7
117,164	-		Dshi_3711	0.67	-1.0
117,255	-		Dshi_3711	0.77	+1.4
117,256	+		Dshi_3711	0.77	+0.5
117,261	+		Dshi_3711	0.77	-1.0
117,269	-		Dshi_3711	0.78	+0.2
117,312	-		Dshi_3711	0.82	-3.3
117,321	-		Dshi_3711	0.83	-3.3
117,336	+		Dshi_3711	0.85	-1.0
117,358	+		Dshi_3711	0.87	-0.9
117,361	-		Dshi_3711	0.87	+0.3
117,366	-		Dshi_3711	0.88	-1.2
117,409	-				-2.3
117,432	+				+0.4
117,432	+				-0.4
117,438	+				-0.6
117,439	+				-2.9
117,441	-				-1.4
117,445	-				-0.9
117,447	-				-2.2
117,448	+				+3.2
117,489	+				-1.3
117,520	+				-0.6
117,525	+				-3.7
117,525	+				-0.6
117,525	+				-1.8
117,530	+				-0.0
117,530	+				-2.2
117,530	+				-0.1
117,530	+				-2.4
117,530	+				-2.2
117,530	+				-0.6
117,533	-				+0.1
117,533	-				+2.4
117,533	-				-0.2
117,533	-				-1.4
117,533	-				-0.6
117,538	-				+1.3
117,538	-				-1.4
117,538	-				-0.3
117,538	-				+0.8
117,538	-				-1.0
117,538	-				+0.3
117,538	-				-1.4
117,538	-				+2.0
117,538	-				-0.8
117,538	-				-0.9
117,538	-				-1.2
117,580	-				-1.9
117,602	-				+0.6
117,612	-				+0.4
117,661	-		Dshi_3712	0.18	-1.1
117,682	-		Dshi_3712	0.20	-3.3
117,707	-		Dshi_3712	0.24	-2.0
117,726	-		Dshi_3712	0.26	-0.6
117,757	-		Dshi_3712	0.30	-1.5
117,760	+		Dshi_3712	0.31	-0.9
117,779	+		Dshi_3712	0.33	+0.9
117,784	+		Dshi_3712	0.34	-1.7
117,785	+		Dshi_3712	0.34	-1.2
117,793	-		Dshi_3712	0.35	-0.8
117,815	-		Dshi_3712	0.38	-2.1
117,842	+		Dshi_3712	0.42	-1.6
117,844	+		Dshi_3712	0.42	+0.6
117,848	+		Dshi_3712	0.42	-2.0
117,857	-		Dshi_3712	0.43	-1.9
117,896	+		Dshi_3712	0.49	-0.4
117,926	-		Dshi_3712	0.53	+0.4
117,926	-		Dshi_3712	0.53	+0.1
117,933	+		Dshi_3712	0.53	+0.4
117,934	-		Dshi_3712	0.54	-3.6
117,980	-		Dshi_3712	0.60	+1.2
117,999	-		Dshi_3712	0.62	+0.4
118,007	+		Dshi_3712	0.63	+0.6
118,008	+		Dshi_3712	0.63	+0.3
118,008	+		Dshi_3712	0.63	+0.1
118,008	+		Dshi_3712	0.63	-0.5
118,008	+		Dshi_3712	0.63	+0.0
118,015	-		Dshi_3712	0.64	-0.9
118,016	-		Dshi_3712	0.64	-0.8
118,016	-		Dshi_3712	0.64	-1.0
118,016	-		Dshi_3712	0.64	-0.2
118,068	-		Dshi_3712	0.71	-0.7
118,102	+		Dshi_3712	0.76	-1.0
118,111	+		Dshi_3712	0.77	-0.8
118,125	+		Dshi_3712	0.79	-2.1
118,133	-		Dshi_3712	0.80	-1.6
118,133	-		Dshi_3712	0.80	-3.0
118,133	-		Dshi_3712	0.80	+1.4
118,135	+		Dshi_3712	0.80	-2.0
118,143	-		Dshi_3712	0.81	+0.1
118,152	+		Dshi_3712	0.82	+0.5
118,160	-		Dshi_3712	0.83	-1.9
118,196	+		Dshi_3712	0.88	-1.2
118,202	+		Dshi_3712	0.89	-1.1
118,211	+				-0.3
118,213	+				+0.4
118,216	+				-2.4
118,219	-				-1.7
118,235	+				+0.6
118,235	+				+0.8
118,235	+				-0.4
118,235	+				+0.6
118,235	+				-0.2
118,235	+				+0.8
118,235	+				-1.7
118,243	-				-0.4
118,243	-				+1.5
118,254	-				-1.5
118,256	-				-0.2
118,339	-				-0.7
118,414	-				+1.0
118,428	+				-0.3
118,436	-				-1.7
118,446	-				-1.0
118,450	-				+1.7
118,463	+				-0.5
118,463	+				+0.0
118,473	-				+1.1