Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3580

Experiment: m.b. Chloramphenicol 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.0002 mg/ml
3,769,758	+		Dshi_3579	0.27	-3.3
3,769,766	-		Dshi_3579	0.28	-1.2
3,769,789	-		Dshi_3579	0.30	+1.5
3,769,812	+		Dshi_3579	0.32	+1.1
3,769,856	-		Dshi_3579	0.37	+0.1
3,769,933	-		Dshi_3579	0.44	+0.1
3,769,971	+		Dshi_3579	0.48	-3.7
3,770,029	+		Dshi_3579	0.54	-0.5
3,770,037	-		Dshi_3579	0.54	+0.1
3,770,073	-		Dshi_3579	0.58	+3.1
3,770,099	-		Dshi_3579	0.61	+1.1
3,770,108	+		Dshi_3579	0.61	-2.8
3,770,108	+		Dshi_3579	0.61	-0.6
3,770,190	+		Dshi_3579	0.70	+0.6
3,770,200	+		Dshi_3579	0.71	-1.9
3,770,221	-		Dshi_3579	0.73	-1.5
3,770,221	-		Dshi_3579	0.73	-1.1
3,770,221	-		Dshi_3579	0.73	+1.1
3,770,221	-		Dshi_3579	0.73	-1.6
3,770,241	-		Dshi_3579	0.75	+1.1
3,770,271	+		Dshi_3579	0.77	-1.0
3,770,279	-		Dshi_3579	0.78	-2.2
3,770,415	+				+0.1
3,770,541	+				+1.1
3,770,541	+				-3.5
3,770,541	+				+2.0
3,770,549	-				+0.5
3,770,549	-				-0.5
3,770,627	-				-0.7
3,770,630	+				+0.5
3,770,651	-				+2.3
3,770,698	-				-1.7
3,770,698	-				+0.3
3,770,709	-				+2.1
3,770,713	+				-1.5
3,770,742	+				-0.7
3,770,742	+				-0.3
3,770,771	+				-3.1
3,770,776	+				+0.5
3,770,779	-				-1.1
3,770,784	-				-3.3
3,770,889	+		Dshi_3580	0.11	-1.3
3,770,902	-		Dshi_3580	0.12	+0.3
3,771,100	+		Dshi_3580	0.26	-2.2
3,771,183	-		Dshi_3580	0.31	+1.8
3,771,236	+		Dshi_3580	0.35	-2.0
3,771,243	+		Dshi_3580	0.35	+1.1
3,771,265	+		Dshi_3580	0.37	-1.0
3,771,316	-		Dshi_3580	0.40	-0.5
3,771,336	-		Dshi_3580	0.42	-2.4
3,771,364	+		Dshi_3580	0.43	+0.5
3,771,569	+		Dshi_3580	0.57	-2.1
3,771,719	-		Dshi_3580	0.67	-0.1
3,771,721	+		Dshi_3580	0.67	+0.7
3,771,721	+		Dshi_3580	0.67	+2.2
3,771,729	-		Dshi_3580	0.68	-0.9
3,771,731	+		Dshi_3580	0.68	-0.5
3,771,739	-		Dshi_3580	0.69	+2.3
3,771,802	+		Dshi_3580	0.73	+0.5
3,771,876	-		Dshi_3580	0.78	+0.2
3,771,882	-		Dshi_3580	0.78	-1.2
3,771,882	-		Dshi_3580	0.78	+1.9
3,771,900	+		Dshi_3580	0.79	-1.3
3,771,964	+		Dshi_3580	0.84	+1.0
3,771,968	+		Dshi_3580	0.84	+1.6
3,772,166	-				-1.9
3,772,278	-				-1.7
3,772,330	-				-3.1
3,772,358	-		Dshi_3581	0.10	+1.1
3,772,375	+		Dshi_3581	0.11	+0.9
3,772,383	-		Dshi_3581	0.12	-0.6
3,772,385	+		Dshi_3581	0.12	-1.3
3,772,390	+		Dshi_3581	0.12	+3.9
3,772,536	+		Dshi_3581	0.23	-0.8
3,772,554	-		Dshi_3581	0.24	-0.5
3,772,596	+		Dshi_3581	0.27	-1.7
3,772,613	-		Dshi_3581	0.28	+1.9
3,772,637	-		Dshi_3581	0.30	-0.5
3,772,647	-		Dshi_3581	0.30	+1.4
3,772,665	+		Dshi_3581	0.32	-2.9
3,772,703	+		Dshi_3581	0.34	+0.1
3,772,731	-		Dshi_3581	0.36	-2.6
3,772,786	-		Dshi_3581	0.40	-0.3
3,772,897	+		Dshi_3581	0.48	+0.5
3,772,930	+		Dshi_3581	0.50	-0.7
3,773,008	-		Dshi_3581	0.55	-3.7
3,773,008	-		Dshi_3581	0.55	-1.7
3,773,033	+		Dshi_3581	0.57	+0.1
3,773,075	+		Dshi_3581	0.60	+1.3
3,773,083	-		Dshi_3581	0.61	-3.0
3,773,145	+		Dshi_3581	0.65	+0.5
3,773,157	+		Dshi_3581	0.66	+1.6
3,773,196	-		Dshi_3581	0.68	+1.0