Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3552

Experiment: m.b. Chloramphenicol 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.0002 mg/ml
3,734,031	-				-0.1
3,734,050	+				+1.6
3,734,174	-		Dshi_3551	0.11	-1.8
3,734,207	+		Dshi_3551	0.15	-1.5
3,734,251	+		Dshi_3551	0.19	+1.1
3,734,300	+		Dshi_3551	0.24	-1.2
3,734,421	+		Dshi_3551	0.36	+2.7
3,734,455	+		Dshi_3551	0.40	-1.2
3,734,546	+		Dshi_3551	0.49	-2.1
3,734,713	-		Dshi_3551	0.66	+3.7
3,734,755	-		Dshi_3551	0.70	+1.1
3,735,089	+				+1.5
3,735,093	-				-2.4
3,735,109	+				-0.9
3,735,109	+				-1.7
3,735,117	-				-2.2
3,735,406	-		Dshi_3552	0.26	+1.1
3,735,483	-		Dshi_3552	0.31	+1.1
3,735,668	+		Dshi_3552	0.43	+0.1
3,735,772	+		Dshi_3552	0.50	-1.5
3,735,780	-		Dshi_3552	0.51	+3.4
3,735,780	-		Dshi_3552	0.51	-0.5
3,735,827	-		Dshi_3552	0.54	-2.1
3,735,829	-		Dshi_3552	0.54	+0.1
3,736,046	+		Dshi_3552	0.69	+1.1
3,736,183	+		Dshi_3552	0.78	-2.3
3,736,260	+		Dshi_3552	0.83	+1.1
3,736,292	-		Dshi_3552	0.85	+0.1
3,736,294	+		Dshi_3552	0.85	-0.9
3,736,294	+		Dshi_3552	0.85	-0.9
3,736,383	+				-2.6
3,736,391	-				-0.9
3,736,437	+				+0.7
3,736,458	+				-0.9
3,736,467	-				+3.4
3,736,476	-				+1.1
3,736,504	+				-1.7
3,736,504	+				+1.1
3,736,539	+				-3.3
3,736,539	+				-0.0
3,736,542	+				+3.7
3,736,585	+				-2.2
3,736,585	+				+0.3
3,736,598	+				-2.5
3,736,600	+				-1.7
3,736,600	+				-2.9
3,736,600	+				+1.1
3,736,600	+				-0.5
3,736,608	-				-1.0
3,736,613	-				-1.8
3,736,641	+				+0.5
3,736,641	+				-0.9
3,736,642	+				-3.0
3,736,646	+				-0.5
3,736,648	+				-2.2
3,736,650	-				+5.2
3,736,654	-				-0.7
3,736,654	-				+1.1
3,736,729	-				+2.1
3,736,744	+				+0.3
3,736,752	+				-0.5
3,736,760	-				+2.1
3,736,760	-				+1.1
3,736,824	+				-1.2
3,736,860	-				+3.1
3,736,862	+				-1.2
3,736,862	+				+2.3
3,736,862	+				-2.6
3,736,862	+				-0.6
3,736,862	+				-2.5
3,736,862	+				+0.9
3,736,862	+				+0.3
3,736,862	+				-4.1
3,736,862	+				+0.8
3,736,870	-				+2.1
3,736,874	+				-3.3
3,736,882	-				+1.1
3,736,882	-				-2.1
3,736,898	-				-2.8
3,736,922	+				-1.9
3,736,923	+				-2.6
3,736,923	+				+2.3
3,736,926	-				-0.9
3,736,926	-				-2.5
3,736,931	+				+0.2
3,736,931	+				-2.6
3,736,931	+				-2.3
3,736,931	+				-1.3
3,736,931	+				-1.7
3,736,939	-				-1.2
3,736,939	-				+1.1
3,736,939	-				+0.5
3,736,939	-				+1.1
3,736,939	-				+3.1
3,736,939	-				-0.9
3,736,939	-				-0.8
3,736,939	-				-0.9
3,736,950	-				-1.7
3,736,950	-				+3.7
3,736,976	-				+1.3
3,736,995	-				+2.6