Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3485

Experiment: m.b. Chloramphenicol 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.0002 mg/ml
3,665,021	+		Dshi_3483	0.61	-4.8
3,665,021	+		Dshi_3483	0.61	-3.5
3,665,029	-		Dshi_3483	0.61	-1.7
3,665,029	-		Dshi_3483	0.61	-3.8
3,665,077	+		Dshi_3483	0.66	-0.5
3,665,120	+		Dshi_3483	0.70	+0.1
3,665,232	+		Dshi_3483	0.80	-1.0
3,665,320	+		Dshi_3483	0.88	-3.7
3,665,338	+				-2.4
3,665,344	-				+3.1
3,665,359	-				-0.7
3,665,390	-				+1.1
3,665,392	-				-0.9
3,665,408	-				-1.2
3,665,483	-				-1.9
3,665,494	+				+0.7
3,665,501	+				+2.7
3,665,565	-		Dshi_3484	0.26	-0.6
3,665,634	-		Dshi_3484	0.47	+1.0
3,665,659	-		Dshi_3484	0.55	+0.3
3,665,717	+		Dshi_3484	0.72	-1.0
3,665,761	-		Dshi_3484	0.85	+1.1
3,665,766	-		Dshi_3484	0.87	-0.1
3,665,799	-				-0.9
3,665,834	-				-3.1
3,665,844	+				-2.2
3,665,844	+				-0.3
3,665,849	+				-0.9
3,665,849	+				-2.1
3,665,849	+				-2.3
3,665,849	+				+0.0
3,665,852	-				-0.7
3,665,852	-				-0.9
3,665,852	-				+1.1
3,665,857	-				-0.9
3,665,857	-				-0.7
3,665,928	+				+0.1
3,665,928	+				-0.6
3,665,928	+				+1.1
3,665,928	+				+1.1
3,665,928	+				-1.0
3,665,936	-				-0.8
3,665,936	-				-0.4
3,665,936	-				-1.8
3,665,936	-				-2.8
3,665,936	-				-0.9
3,665,936	-				-1.2
3,665,937	-				+0.1
3,665,937	-				-3.1
3,665,937	-				-1.7
3,665,937	-				-0.9
3,665,937	-				-0.1
3,665,937	-				-1.5
3,665,958	+				-0.5
3,665,977	+				+0.4
3,665,984	+				-1.7
3,665,991	-				+1.1
3,665,998	+				-4.3
3,665,998	+				-0.6
3,666,003	+				+0.8
3,666,003	+				+1.1
3,666,006	-				-1.5
3,666,006	-				-0.9
3,666,016	-				-1.5
3,666,033	+				-1.9
3,666,040	+				-1.0
3,666,098	-		Dshi_3485	0.10	-1.5
3,666,107	+		Dshi_3485	0.11	-2.1
3,666,110	-		Dshi_3485	0.11	-0.1
3,666,177	+		Dshi_3485	0.17	-2.5
3,666,190	-		Dshi_3485	0.18	-1.3
3,666,192	+		Dshi_3485	0.18	+0.1
3,666,197	+		Dshi_3485	0.18	-0.3
3,666,197	+		Dshi_3485	0.18	+1.1
3,666,200	-		Dshi_3485	0.19	-0.5
3,666,200	-		Dshi_3485	0.19	-0.0
3,666,205	-		Dshi_3485	0.19	-1.7
3,666,205	-		Dshi_3485	0.19	+1.1
3,666,248	+		Dshi_3485	0.22	-0.4
3,666,251	-		Dshi_3485	0.23	+1.1
3,666,332	-		Dshi_3485	0.29	-2.3
3,666,378	+		Dshi_3485	0.33	-1.5
3,666,391	+		Dshi_3485	0.34	-1.0
3,666,395	-		Dshi_3485	0.34	-0.6
3,666,395	-		Dshi_3485	0.34	-1.7
3,666,423	+		Dshi_3485	0.36	+0.5
3,666,452	-		Dshi_3485	0.38	+0.1
3,666,493	+		Dshi_3485	0.42	-3.7
3,666,535	-		Dshi_3485	0.45	-3.0
3,666,550	-		Dshi_3485	0.46	-2.3
3,666,563	-		Dshi_3485	0.47	-0.9
3,666,573	+		Dshi_3485	0.48	-0.5
3,666,573	+		Dshi_3485	0.48	-1.2
3,666,573	+		Dshi_3485	0.48	-1.5
3,666,573	+		Dshi_3485	0.48	-3.3
3,666,581	-		Dshi_3485	0.49	-1.1
3,666,597	-		Dshi_3485	0.50	-0.9
3,666,632	+		Dshi_3485	0.53	-2.3
3,666,739	-		Dshi_3485	0.61	-3.9
3,666,740	+		Dshi_3485	0.61	-2.3
3,666,810	+		Dshi_3485	0.67	-2.8
3,666,810	+		Dshi_3485	0.67	+1.1
3,666,810	+		Dshi_3485	0.67	-0.5
3,666,880	+		Dshi_3485	0.72	-3.4
3,667,110	+				-1.7
3,667,118	-				+0.4
3,667,140	-				-0.5
3,667,157	+				-2.7
3,667,227	+				+2.1
3,667,235	-				-0.5
3,667,235	-				-0.4
3,667,291	-				-1.5
3,667,367	+		Dshi_3486	0.23	-0.9
3,667,378	+		Dshi_3486	0.26	+0.5
3,667,485	-		Dshi_3486	0.49	+1.6
3,667,520	-		Dshi_3486	0.57	-0.6
3,667,525	-		Dshi_3486	0.58	+3.1
3,667,540	-		Dshi_3486	0.61	+0.9
3,667,561	+		Dshi_3486	0.66	-3.9
3,667,561	+		Dshi_3486	0.66	-0.9
3,667,616	+		Dshi_3486	0.78	+0.8
3,667,642	+		Dshi_3486	0.84	-1.3
3,667,720	+				-2.3
3,667,720	+				-0.9
3,667,740	+				-0.6
3,667,767	+				+2.1
3,667,774	+				-0.5
3,667,785	+				-0.3
3,667,795	+				+0.1
3,667,803	-				-0.9
3,667,803	-				+4.9
3,667,803	-				-1.3
3,667,818	-				+0.7
3,667,818	-				+2.1
3,667,826	-				+0.4
3,667,974	-		Dshi_3487	0.16	-0.9
3,668,209	+		Dshi_3487	0.40	-0.7