Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3476

Experiment: m.b. Chloramphenicol 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.0002 mg/ml
3,658,508	+		Dshi_3474	0.85	-0.2
3,658,511	-		Dshi_3474	0.86	+2.1
3,658,597	+				+0.5
3,658,597	+				-0.0
3,658,597	+				+1.7
3,658,605	-				+0.4
3,658,605	-				+0.2
3,658,610	+				+1.1
3,658,662	-				+0.8
3,658,662	-				-0.6
3,658,669	+				-0.3
3,658,684	-				-0.6
3,658,780	-		Dshi_3475	0.15	+0.1
3,658,885	+		Dshi_3475	0.27	+0.3
3,658,903	+		Dshi_3475	0.29	+0.6
3,658,911	-		Dshi_3475	0.30	-1.0
3,658,958	-		Dshi_3475	0.36	+2.4
3,658,996	-		Dshi_3475	0.40	-2.2
3,659,002	+		Dshi_3475	0.41	-1.2
3,659,054	+		Dshi_3475	0.47	-0.7
3,659,071	+		Dshi_3475	0.49	-0.5
3,659,082	-		Dshi_3475	0.51	-1.2
3,659,213	+		Dshi_3475	0.66	-0.2
3,659,247	+		Dshi_3475	0.70	+3.1
3,659,282	-		Dshi_3475	0.75	-0.2
3,659,353	-		Dshi_3475	0.83	+2.1
3,659,353	-		Dshi_3475	0.83	-2.5
3,659,400	-		Dshi_3475	0.89	+0.7
3,659,428	+				-0.9
3,659,431	-				+1.6
3,659,476	+				+2.1
3,659,512	-				-2.6
3,659,580	-		Dshi_3476	0.12	+0.8
3,659,580	-		Dshi_3476	0.12	-1.0
3,659,599	-		Dshi_3476	0.15	-1.5
3,659,641	+		Dshi_3476	0.22	+0.4
3,659,684	+		Dshi_3476	0.29	+0.6
3,659,697	+		Dshi_3476	0.31	+0.2
3,659,697	+		Dshi_3476	0.31	-3.1
3,659,721	+		Dshi_3476	0.35	+0.5
3,659,721	+		Dshi_3476	0.35	+0.1
3,659,729	-		Dshi_3476	0.36	-0.8
3,659,729	-		Dshi_3476	0.36	+0.8
3,659,729	-		Dshi_3476	0.36	-0.8
3,659,729	-		Dshi_3476	0.36	+0.3
3,659,729	-		Dshi_3476	0.36	+0.3
3,659,866	-		Dshi_3476	0.59	+3.6
3,659,876	-		Dshi_3476	0.60	-0.9
3,659,964	+		Dshi_3476	0.75	-0.4
3,659,978	-		Dshi_3476	0.77	+0.2
3,659,986	+		Dshi_3476	0.78	+1.5
3,659,988	-		Dshi_3476	0.79	+0.5
3,660,029	+		Dshi_3476	0.85	+1.4
3,660,031	+		Dshi_3476	0.86	-0.5
3,660,038	+		Dshi_3476	0.87	+2.4
3,660,038	+		Dshi_3476	0.87	-0.4
3,660,046	-		Dshi_3476	0.88	+0.5
3,660,046	-		Dshi_3476	0.88	-0.9
3,660,047	-		Dshi_3476	0.88	-0.9
3,660,069	-				+1.1
3,660,084	-				-3.8
3,660,105	-				-1.0
3,660,108	+				+0.3
3,660,153	+				+0.6
3,660,160	-				+0.3
3,660,172	+				-0.2
3,660,199	+		Dshi_3477	0.10	+0.2
3,660,207	-		Dshi_3477	0.12	+1.0
3,660,215	-		Dshi_3477	0.13	-0.8
3,660,220	-		Dshi_3477	0.13	-0.7
3,660,288	+		Dshi_3477	0.22	-0.1
3,660,376	-		Dshi_3477	0.34	-0.4
3,660,376	-		Dshi_3477	0.34	-0.6
3,660,417	-		Dshi_3477	0.40	-2.7
3,660,497	-		Dshi_3477	0.51	+0.1
3,660,540	+		Dshi_3477	0.57	+0.6
3,660,605	+		Dshi_3477	0.65	+0.2
3,660,613	-		Dshi_3477	0.67	+0.1
3,660,618	-		Dshi_3477	0.67	-0.6
3,660,649	-		Dshi_3477	0.71	-0.8
3,660,682	+		Dshi_3477	0.76	-2.1
3,660,735	+		Dshi_3477	0.83	+0.6
3,660,777	+		Dshi_3477	0.89	-1.0
3,660,841	+				-3.5
3,660,863	-				-0.8
3,660,863	-				-1.5
3,660,863	-				+0.6
3,660,927	-		Dshi_3478	0.18	+1.7
3,660,952	-		Dshi_3478	0.25	+1.0
3,660,954	+		Dshi_3478	0.25	+1.4
3,660,962	-		Dshi_3478	0.27	-0.5
3,660,967	+		Dshi_3478	0.29	+0.5
3,660,978	+		Dshi_3478	0.32	-0.7
3,660,983	+		Dshi_3478	0.33	-0.7
3,661,044	+		Dshi_3478	0.49	-1.9
3,661,090	+		Dshi_3478	0.60	+0.3