Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3431

Experiment: m.b. Chloramphenicol 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.0002 mg/ml
3,610,513	-		Dshi_3429	0.62	-2.7
3,610,523	-		Dshi_3429	0.63	-0.6
3,610,534	+		Dshi_3429	0.65	-0.7
3,610,561	+		Dshi_3429	0.69	+0.8
3,610,561	+		Dshi_3429	0.69	-2.7
3,610,574	-		Dshi_3429	0.72	+1.9
3,610,574	-		Dshi_3429	0.72	+0.1
3,610,577	+		Dshi_3429	0.72	+0.3
3,610,577	+		Dshi_3429	0.72	-1.5
3,610,577	+		Dshi_3429	0.72	+0.1
3,610,634	-		Dshi_3429	0.81	+1.0
3,610,660	+		Dshi_3429	0.86	-0.6
3,610,661	+		Dshi_3429	0.86	-0.4
3,610,661	+		Dshi_3429	0.86	-0.2
3,610,661	+		Dshi_3429	0.86	-0.2
3,610,711	-				+1.6
3,610,711	-				-0.6
3,610,711	-				-1.7
3,610,764	-				+1.8
3,610,770	+				+5.8
3,610,770	-				+0.7
3,610,770	-				+0.7
3,610,778	-				-0.5
3,610,788	+				-2.5
3,610,788	+				+0.9
3,610,788	+				-0.7
3,610,788	+				+1.1
3,610,796	-				+0.3
3,610,796	-				-1.1
3,611,418	+				-2.6
3,611,494	-				-1.3
3,611,510	-				-2.0
3,611,512	-				+0.9
3,611,513	-				+0.9
3,611,513	-				+1.5
3,611,523	-				-2.3
3,611,546	-				+2.7
3,611,553	-				-0.7
3,611,563	-		Dshi_3431	0.10	+2.3
3,611,563	-		Dshi_3431	0.10	+2.4
3,611,588	+		Dshi_3431	0.14	-1.8
3,611,588	+		Dshi_3431	0.14	+1.1
3,611,589	-		Dshi_3431	0.14	-0.6
3,611,605	-		Dshi_3431	0.17	+2.1
3,611,606	+		Dshi_3431	0.17	+0.6
3,611,606	+		Dshi_3431	0.17	-1.7
3,611,614	-		Dshi_3431	0.18	-0.4
3,611,614	-		Dshi_3431	0.18	-1.7
3,611,628	+		Dshi_3431	0.20	-0.3
3,611,636	-		Dshi_3431	0.22	+1.8
3,611,638	-		Dshi_3431	0.22	-1.8
3,611,652	+		Dshi_3431	0.24	+0.5
3,611,667	+		Dshi_3431	0.27	-0.1
3,611,668	+		Dshi_3431	0.27	-0.7
3,611,668	-		Dshi_3431	0.27	-2.6
3,611,688	+		Dshi_3431	0.30	+1.9
3,611,688	+		Dshi_3431	0.30	+0.8
3,611,688	+		Dshi_3431	0.30	-0.5
3,611,696	-		Dshi_3431	0.31	-0.1
3,611,696	-		Dshi_3431	0.31	+3.1
3,611,696	-		Dshi_3431	0.31	-0.9
3,611,696	-		Dshi_3431	0.31	-3.3
3,611,696	-		Dshi_3431	0.31	+1.4
3,611,701	+		Dshi_3431	0.32	-2.6
3,611,709	-		Dshi_3431	0.33	+0.1
3,611,709	-		Dshi_3431	0.33	+0.2
3,611,761	+		Dshi_3431	0.42	-0.5
3,611,769	-		Dshi_3431	0.43	+0.3
3,611,774	-		Dshi_3431	0.44	-1.3
3,611,775	-		Dshi_3431	0.44	-1.9
3,611,775	-		Dshi_3431	0.44	-0.8
3,611,792	+		Dshi_3431	0.47	+2.5
3,611,800	-		Dshi_3431	0.48	-0.1
3,611,800	-		Dshi_3431	0.48	-0.6
3,611,825	-		Dshi_3431	0.52	-1.9
3,611,870	-		Dshi_3431	0.59	-1.2
3,611,875	+		Dshi_3431	0.60	+0.2
3,611,875	+		Dshi_3431	0.60	+0.6
3,611,875	+		Dshi_3431	0.60	+1.1
3,611,875	+		Dshi_3431	0.60	+2.4
3,611,883	-		Dshi_3431	0.62	-0.5
3,611,883	-		Dshi_3431	0.62	-3.1
3,611,883	-		Dshi_3431	0.62	-3.1
3,611,883	-		Dshi_3431	0.62	+0.1
3,611,883	-		Dshi_3431	0.62	+0.1
3,611,883	-		Dshi_3431	0.62	+2.0
3,611,883	-		Dshi_3431	0.62	+0.8
3,611,883	-		Dshi_3431	0.62	-0.6
3,611,883	-				+1.1
3,611,883	-		Dshi_3431	0.62	+2.7
3,611,883	-		Dshi_3431	0.62	+0.3
3,611,883	-		Dshi_3431	0.62	+0.4
3,611,898	+		Dshi_3431	0.64	+1.7
3,611,908	+		Dshi_3431	0.66	+1.0
3,611,909	+		Dshi_3431	0.66	+0.7
3,611,909	+		Dshi_3431	0.66	-0.3
3,611,926	-		Dshi_3431	0.68	+0.2
3,611,942	+		Dshi_3431	0.71	+1.2
3,612,024	+		Dshi_3431	0.84	-1.0
3,612,074	+				-0.3
3,612,074	-				+0.6
3,612,081	+				-0.7
3,612,089	-				-2.8
3,612,089	-				+2.3
3,612,089	-				-0.5
3,612,089	-				-0.1
3,612,108	+				+1.8
3,612,116	-				+1.1
3,612,116	-				-0.6
3,612,124	-				+0.1
3,612,132	+				+0.5
3,612,132	+				+0.5
3,612,149	+				-0.1
3,612,170	-				-0.9
3,612,179	+				-2.3
3,612,182	-				+0.4
3,612,187	-				+0.1
3,612,194	+				+0.9
3,612,216	-				-0.9
3,612,275	-				-0.8
3,612,406	+		Dshi_3432	0.13	-1.9
3,612,414	-		Dshi_3432	0.14	-0.3
3,612,414	-		Dshi_3432	0.14	+0.6
3,612,481	-		Dshi_3432	0.18	-1.3
3,612,484	+		Dshi_3432	0.19	-1.7
3,612,492	-		Dshi_3432	0.19	+0.2
3,612,541	+		Dshi_3432	0.23	+1.4
3,612,549	-		Dshi_3432	0.23	+0.4
3,612,550	-		Dshi_3432	0.23	+1.6
3,612,559	-		Dshi_3432	0.24	-0.1
3,612,559	-		Dshi_3432	0.24	+1.9
3,612,559	-		Dshi_3432	0.24	+1.3