Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3348

Experiment: m.b. Chloramphenicol 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.0002 mg/ml
3,515,084	-		Dshi_3346	0.87	+0.3
3,515,112	+		Dshi_3346	0.89	+0.1
3,515,120	-		Dshi_3346	0.89	+0.8
3,515,179	+				-0.2
3,515,190	+				-0.3
3,515,383	-				-0.5
3,515,401	-				-0.6
3,515,477	-		Dshi_3347	0.15	-0.7
3,515,477	-		Dshi_3347	0.15	+0.3
3,515,551	+		Dshi_3347	0.27	+1.1
3,515,559	-		Dshi_3347	0.28	-0.5
3,515,606	+		Dshi_3347	0.36	+2.1
3,515,606	+		Dshi_3347	0.36	+0.2
3,515,641	+		Dshi_3347	0.42	+1.0
3,515,703	-		Dshi_3347	0.52	-2.2
3,515,741	-		Dshi_3347	0.59	-0.5
3,515,746	-		Dshi_3347	0.59	-1.3
3,515,753	+		Dshi_3347	0.61	-3.4
3,515,755	-		Dshi_3347	0.61	-3.6
3,515,778	-		Dshi_3347	0.65	-2.9
3,515,853	-		Dshi_3347	0.77	+0.2
3,515,906	+		Dshi_3347	0.86	+1.7
3,515,927	+		Dshi_3347	0.89	-2.1
3,516,004	+				+1.1
3,516,009	+				-1.0
3,516,017	-				+1.1
3,516,036	-				-1.2
3,516,074	+				-2.6
3,516,086	-				-0.3
3,516,096	+				-1.8
3,516,120	-				-3.8
3,516,298	+		Dshi_3348	0.26	+1.1
3,516,407	-		Dshi_3348	0.38	-1.9
3,516,416	+		Dshi_3348	0.39	-0.5
3,516,435	+		Dshi_3348	0.41	-1.2
3,516,600	+		Dshi_3348	0.58	-0.6
3,516,612	+		Dshi_3348	0.59	-2.2
3,516,662	+		Dshi_3348	0.65	+1.1
3,516,670	-		Dshi_3348	0.66	-2.5
3,516,797	+		Dshi_3348	0.79	-3.1
3,516,927	-				-0.4
3,516,951	+				+0.7
3,516,959	-				-2.9
3,516,959	-				+2.4
3,516,982	+				+2.5
3,517,031	+				-0.5
3,517,054	+				+0.1
3,517,198	+		Dshi_3349	0.15	-0.8
3,517,204	-		Dshi_3349	0.16	-1.9
3,517,206	-		Dshi_3349	0.16	-1.0
3,517,211	+		Dshi_3349	0.16	-0.9
3,517,267	+		Dshi_3349	0.22	+1.5
3,517,311	+		Dshi_3349	0.26	-2.1
3,517,468	-		Dshi_3349	0.41	+0.1
3,517,491	+		Dshi_3349	0.43	+0.1
3,517,545	-		Dshi_3349	0.48	-1.4
3,517,584	-		Dshi_3349	0.52	-1.7
3,517,688	-		Dshi_3349	0.61	+2.1
3,517,728	-		Dshi_3349	0.65	+1.7
3,517,808	-		Dshi_3349	0.73	+0.1
3,517,810	-		Dshi_3349	0.73	-3.6
3,517,824	+		Dshi_3349	0.74	+2.2
3,517,879	-		Dshi_3349	0.79	+1.1
3,517,881	+		Dshi_3349	0.80	-3.4
3,517,889	-		Dshi_3349	0.80	+2.4
3,517,976	+		Dshi_3349	0.89	+1.4