Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3311

Experiment: m.b. Chloramphenicol 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.0002 mg/ml
3,473,266	-				+1.6
3,473,282	+				+0.7
3,473,284	+				+3.2
3,473,312	+				+0.2
3,473,325	-				-0.4
3,473,340	+				+0.8
3,473,468	-		Dshi_3310	0.14	-0.1
3,473,550	+		Dshi_3310	0.25	-1.2
3,473,567	-		Dshi_3310	0.27	+1.2
3,473,593	-		Dshi_3310	0.30	-1.8
3,473,617	+		Dshi_3310	0.33	+0.5
3,473,808	+		Dshi_3310	0.57	+1.2
3,473,816	-		Dshi_3310	0.58	-2.4
3,473,916	-		Dshi_3310	0.70	-2.3
3,474,063	-		Dshi_3310	0.88	-2.9
3,474,283	-		Dshi_3311	0.10	-1.4
3,474,444	+		Dshi_3311	0.24	-0.5
3,474,452	-		Dshi_3311	0.24	+0.3
3,474,490	+		Dshi_3311	0.27	-0.4
3,474,500	+		Dshi_3311	0.28	-0.8
3,474,500	+		Dshi_3311	0.28	+1.2
3,474,526	-		Dshi_3311	0.30	-0.6
3,474,576	-		Dshi_3311	0.34	+1.2
3,474,576	-		Dshi_3311	0.34	-1.4
3,474,601	+		Dshi_3311	0.37	-1.4
3,474,654	+		Dshi_3311	0.41	-2.7
3,474,677	+		Dshi_3311	0.43	-1.2
3,474,727	-		Dshi_3311	0.47	-3.3
3,474,753	+		Dshi_3311	0.49	+1.2
3,474,817	-		Dshi_3311	0.54	-0.5
3,474,846	+		Dshi_3311	0.57	+1.2
3,474,874	+		Dshi_3311	0.59	-1.8
3,474,963	+		Dshi_3311	0.66	+0.1
3,474,997	+		Dshi_3311	0.69	+1.2
3,475,033	-		Dshi_3311	0.72	-1.6
3,475,113	+		Dshi_3311	0.78	+3.7
3,475,115	-		Dshi_3311	0.79	+1.2
3,475,143	-		Dshi_3311	0.81	-1.8
3,475,245	+		Dshi_3311	0.89	-2.4
3,475,250	+		Dshi_3311	0.90	-2.8
3,475,250	+				+1.2
3,475,258	-				-1.0
3,475,258	-				+1.2
3,475,282	-				-0.1
3,475,290	-				+0.2
3,475,301	+				-1.1
3,475,305	+				+1.6
3,475,345	-				-1.2
3,475,349	+				-1.4
3,475,373	-				-0.4
3,475,373	-				-0.4
3,475,494	-				-0.4
3,475,496	+				-2.7
3,475,524	+				+1.2
3,475,524	+				+0.7
3,475,532	-				+1.2
3,475,532	-				-0.9
3,475,537	+				-2.8
3,475,545	-				+0.0
3,475,545	-				+2.2
3,475,622	-		Dshi_3312	0.15	+0.2
3,475,652	+		Dshi_3312	0.19	+0.7
3,475,660	-		Dshi_3312	0.20	-0.4
3,475,699	-		Dshi_3312	0.26	-2.0
3,475,699	-		Dshi_3312	0.26	+1.2
3,475,704	+		Dshi_3312	0.27	+1.2
3,475,734	-		Dshi_3312	0.31	+2.7
3,475,783	-		Dshi_3312	0.38	+0.2
3,475,838	+		Dshi_3312	0.47	+1.2
3,476,194	+				+1.2
3,476,245	+				-3.2
3,476,269	-		Dshi_3313	0.10	+0.4
3,476,277	+		Dshi_3313	0.11	-0.5
3,476,285	-		Dshi_3313	0.13	+2.1
3,476,319	-		Dshi_3313	0.17	-1.5
3,476,338	-		Dshi_3313	0.20	-0.9