Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3036

Experiment: m.b. Chloramphenicol 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.0002 mg/ml
3,202,527	+				+1.3
3,202,592	+				-1.0
3,202,600	-				-2.0
3,202,699	-		Dshi_3034	0.21	+1.3
3,202,712	+		Dshi_3034	0.27	+1.0
3,202,883	+				-0.3
3,202,932	+				+1.3
3,202,937	+		Dshi_3035	0.11	-0.1
3,203,003	+		Dshi_3035	0.28	+1.3
3,203,011	-		Dshi_3035	0.30	-1.9
3,203,065	+		Dshi_3035	0.43	+3.9
3,203,068	-		Dshi_3035	0.44	+1.3
3,203,073	-		Dshi_3035	0.45	+4.1
3,203,096	+		Dshi_3035	0.51	-1.3
3,203,096	-		Dshi_3035	0.51	-0.4
3,203,104	-		Dshi_3035	0.53	+0.2
3,203,111	-		Dshi_3035	0.55	+0.7
3,203,196	-		Dshi_3035	0.76	+0.3
3,203,228	-		Dshi_3035	0.84	+2.3
3,203,266	+				+0.0
3,203,302	+				+1.3
3,203,313	-				-2.2
3,203,339	-				-0.7
3,203,429	+				-2.2
3,203,583	+				-0.8
3,203,600	+				+0.3
3,203,629	-				-2.8
3,203,704	-				+3.1
3,203,783	+		Dshi_3036	0.12	+1.3
3,203,961	-		Dshi_3036	0.18	+1.3
3,203,971	+		Dshi_3036	0.18	-1.2
3,203,971	+		Dshi_3036	0.18	-1.8
3,203,979	-		Dshi_3036	0.18	-1.3
3,203,979	-		Dshi_3036	0.18	+1.3
3,204,061	-		Dshi_3036	0.21	-3.1
3,204,071	-		Dshi_3036	0.21	+1.5
3,204,098	-		Dshi_3036	0.22	-1.3
3,204,171	+		Dshi_3036	0.24	+1.3
3,204,171	+		Dshi_3036	0.24	-0.7
3,204,358	+		Dshi_3036	0.30	+0.3
3,204,375	-		Dshi_3036	0.30	-2.4
3,204,412	-		Dshi_3036	0.32	+1.3
3,204,421	+		Dshi_3036	0.32	-1.1
3,204,487	-		Dshi_3036	0.34	-1.7
3,204,496	-		Dshi_3036	0.34	+1.3
3,204,500	-		Dshi_3036	0.34	-2.6
3,204,543	+		Dshi_3036	0.36	+1.3
3,204,546	-		Dshi_3036	0.36	-1.7
3,204,556	+		Dshi_3036	0.36	-1.0
3,204,571	+				+1.3
3,204,579	-		Dshi_3036	0.37	+1.3
3,204,690	+		Dshi_3036	0.40	+1.3
3,204,695	+		Dshi_3036	0.40	+1.3
3,205,023	+		Dshi_3036	0.51	-3.4
3,205,028	-		Dshi_3036	0.51	+0.3
3,205,045	+		Dshi_3036	0.51	-2.0
3,205,141	-		Dshi_3036	0.54	+0.7
3,205,194	-		Dshi_3036	0.56	-1.3
3,205,208	+		Dshi_3036	0.56	+0.2
3,205,309	-		Dshi_3036	0.59	-1.5
3,205,372	+		Dshi_3036	0.61	-1.6
3,205,375	-		Dshi_3036	0.61	-1.7
3,205,493	+		Dshi_3036	0.65	+0.3
3,205,493	+		Dshi_3036	0.65	-1.3
3,205,575	+		Dshi_3036	0.68	+1.3
3,205,588	-		Dshi_3036	0.68	-1.3
3,205,611	-		Dshi_3036	0.69	-1.8
3,205,671	+		Dshi_3036	0.71	+1.3
3,205,677	+		Dshi_3036	0.71	+3.3
3,205,878	-		Dshi_3036	0.77	+0.6
3,205,906	+		Dshi_3036	0.78	-1.0
3,205,921	+		Dshi_3036	0.78	+1.3
3,206,031	+		Dshi_3036	0.82	+3.3
3,206,052	-		Dshi_3036	0.82	-1.0
3,206,053	-		Dshi_3036	0.82	-1.8
3,206,218	-		Dshi_3036	0.88	-2.7
3,206,252	-		Dshi_3036	0.89	-1.5
3,206,295	+				+1.3
3,206,357	-				+0.4
3,206,390	-				+1.3
3,206,444	-				-1.8
3,206,465	-				+0.2
3,206,564	-				-2.1
3,206,594	-				-0.7
3,206,608	-				-1.3
3,206,617	+				+1.7
3,206,667	+				-0.8
3,206,722	+				+0.3
3,206,806	-		Dshi_3037	0.16	+0.8
3,206,840	+		Dshi_3037	0.19	+1.3
3,206,860	-		Dshi_3037	0.20	-2.3
3,206,873	+		Dshi_3037	0.21	+1.3
3,206,937	-		Dshi_3037	0.27	-2.4
3,207,027	-		Dshi_3037	0.34	+0.3
3,207,100	+		Dshi_3037	0.40	+0.7
3,207,100	+		Dshi_3037	0.40	-3.3
3,207,100	+		Dshi_3037	0.40	+0.3
3,207,108	-		Dshi_3037	0.41	+1.4
3,207,108	-		Dshi_3037	0.41	-2.9
3,207,172	+		Dshi_3037	0.46	+1.3
3,207,180	-		Dshi_3037	0.47	-1.0
3,207,194	+		Dshi_3037	0.48	-1.5
3,207,202	-		Dshi_3037	0.48	-1.0
3,207,226	+		Dshi_3037	0.50	+1.7
3,207,273	+		Dshi_3037	0.54	-0.5
3,207,281	-		Dshi_3037	0.55	+1.3
3,207,405	-		Dshi_3037	0.65	+1.3
3,207,405	-		Dshi_3037	0.65	+3.7
3,207,451	-		Dshi_3037	0.69	-0.3
3,207,465	+		Dshi_3037	0.70	+2.7
3,207,480	+		Dshi_3037	0.71	-2.0