Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2950
Experiment: m.b. Chloramphenicol 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Chloramphenicol 0.0002 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,110,562 | + | Dshi_2949 | 0.67 | -0.2 | |
3,110,707 | + | Dshi_2949 | 0.73 | -1.9 | |
3,110,731 | + | Dshi_2949 | 0.74 | -1.3 | |
3,110,917 | - | Dshi_2949 | 0.82 | -1.4 | |
3,110,932 | + | Dshi_2949 | 0.83 | -1.9 | |
3,111,162 | - | +1.3 | |||
3,111,425 | + | -2.6 | |||
3,111,425 | + | -0.5 | |||
3,111,554 | - | Dshi_2950 | 0.19 | -1.9 | |
3,111,819 | - | Dshi_2950 | 0.77 | +1.0 | |
3,111,843 | + | Dshi_2950 | 0.82 | +2.1 | |
3,112,125 | + | +2.3 | |||
3,112,133 | - | +0.5 | |||
3,112,133 | - | +0.9 | |||
3,112,220 | - | -2.2 | |||
3,112,329 | - | Dshi_2951 | 0.17 | -0.2 | |
3,112,360 | - | Dshi_2951 | 0.20 | -2.3 | |
3,112,659 | + | Dshi_2951 | 0.46 | -0.5 | |
3,112,665 | - | Dshi_2951 | 0.46 | -1.5 | |
3,112,884 | - | Dshi_2951 | 0.65 | +1.3 | |
3,112,897 | + | Dshi_2951 | 0.66 | +1.3 |
Or see this region's nucleotide sequence