Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2644
Experiment: m.b. Chloramphenicol 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Chloramphenicol 0.0002 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,800,374 | + | -3.0 | |||
2,800,430 | + | -1.7 | |||
2,800,497 | - | Dshi_2643 | 0.14 | +1.2 | |
2,800,725 | + | Dshi_2643 | 0.38 | +0.8 | |
2,800,787 | - | Dshi_2643 | 0.44 | -1.1 | |
2,800,925 | + | Dshi_2643 | 0.59 | +2.4 | |
2,801,080 | + | Dshi_2643 | 0.75 | +3.7 | |
2,801,089 | - | Dshi_2643 | 0.76 | -2.3 | |
2,801,128 | + | Dshi_2643 | 0.80 | -0.8 | |
2,801,144 | - | Dshi_2643 | 0.82 | -1.8 | |
2,801,182 | + | Dshi_2643 | 0.86 | -1.2 | |
2,801,220 | + | Dshi_2643 | 0.90 | +0.6 | |
2,801,281 | - | +0.4 | |||
2,801,375 | - | Dshi_2644 | 0.17 | +1.2 | |
2,801,453 | + | Dshi_2644 | 0.40 | -1.2 | |
2,801,453 | + | Dshi_2644 | 0.40 | +1.2 | |
2,801,486 | - | Dshi_2644 | 0.50 | +1.2 | |
2,801,598 | - | Dshi_2644 | 0.83 | +1.0 | |
2,802,529 | + | -1.2 | |||
2,802,597 | + | Dshi_2646 | 0.16 | -2.8 | |
2,802,597 | + | Dshi_2646 | 0.16 | +1.2 | |
2,802,605 | - | Dshi_2646 | 0.18 | +1.2 | |
2,802,605 | - | Dshi_2646 | 0.18 | +0.2 |
Or see this region's nucleotide sequence