Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2514

Experiment: m.b. Chloramphenicol 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.0002 mg/ml
2,676,570	-		Dshi_2512	0.54	-0.1
2,676,740	+		Dshi_2512	0.71	+0.2
2,676,766	+		Dshi_2512	0.74	+1.1
2,676,790	-		Dshi_2512	0.76	+0.1
2,676,886	-		Dshi_2512	0.85	+2.6
2,676,962	-				-1.5
2,677,038	-				+0.5
2,677,072	+				+1.1
2,677,079	-				+0.3
2,677,086	+				+3.4
2,677,160	-		Dshi_2513	0.27	+1.3
2,677,169	-		Dshi_2513	0.29	+1.4
2,677,256	+		Dshi_2513	0.50	+1.7
2,677,271	+		Dshi_2513	0.53	+0.8
2,677,309	-		Dshi_2513	0.63	+1.1
2,677,317	+		Dshi_2513	0.64	+0.3
2,677,324	-		Dshi_2513	0.66	-0.5
2,677,343	+		Dshi_2513	0.71	+1.0
2,677,356	-		Dshi_2513	0.74	-1.1
2,677,375	+		Dshi_2513	0.79	+0.8
2,677,376	+		Dshi_2513	0.79	-0.7
2,677,388	-		Dshi_2513	0.82	+0.1
2,677,421	-		Dshi_2513	0.90	-0.3
2,677,472	+				+1.3
2,677,496	-				-0.3
2,677,529	+				+0.1
2,677,540	+				-0.2
2,677,540	+				-1.5
2,677,542	+				+0.3
2,677,545	+				+1.6
2,677,547	-				-1.9
2,677,548	-				+0.4
2,677,569	-				+2.9
2,677,598	-				+1.1
2,677,667	-		Dshi_2514	0.12	+3.4
2,677,691	+		Dshi_2514	0.14	+0.8
2,677,692	+		Dshi_2514	0.15	+1.1
2,677,697	+		Dshi_2514	0.15	+1.5
2,677,697	+		Dshi_2514	0.15	-1.2
2,677,710	-		Dshi_2514	0.16	-1.3
2,677,785	-		Dshi_2514	0.24	+0.5
2,677,833	-		Dshi_2514	0.29	-0.5
2,677,838	+		Dshi_2514	0.29	-1.0
2,677,913	-		Dshi_2514	0.37	+1.1
2,677,930	-		Dshi_2514	0.38	-1.5
2,677,930	-		Dshi_2514	0.38	-0.6
2,677,937	-		Dshi_2514	0.39	-0.5
2,677,975	+		Dshi_2514	0.43	-0.8
2,677,978	-		Dshi_2514	0.43	+1.7
2,677,999	-		Dshi_2514	0.45	+0.2
2,678,046	-		Dshi_2514	0.50	+1.9
2,678,058	+		Dshi_2514	0.51	+2.1
2,678,058	+		Dshi_2514	0.51	-0.7
2,678,113	+		Dshi_2514	0.57	-0.1
2,678,120	+		Dshi_2514	0.58	-1.6
2,678,143	-		Dshi_2514	0.60	-0.2
2,678,157	+		Dshi_2514	0.61	+0.5
2,678,186	-		Dshi_2514	0.64	-2.0
2,678,268	+		Dshi_2514	0.73	+1.5
2,678,277	-		Dshi_2514	0.73	-2.3
2,678,443	+				-1.0
2,678,445	+				+0.1
2,678,453	-				+0.6
2,678,460	+				+0.6
2,678,468	-				-0.2
2,678,468	-				-2.5
2,678,478	-				+0.6
2,678,524	+				+3.0
2,678,524	+				+1.4
2,678,524	+				+0.4
2,678,532	-				-0.8
2,678,532	-				-1.5
2,678,532	-				-4.1
2,678,532	-				+2.1
2,678,543	-				+3.9
2,678,612	+				-0.1
2,678,612	+				+1.1
2,678,612	+				-1.1
2,678,620	-				-0.7
2,678,662	-				-2.2
2,678,669	+				-0.0
2,678,675	+				+0.5
2,678,718	-				-2.2
2,678,741	-				-1.9
2,678,783	+				+0.2
2,678,788	+				-1.2
2,678,812	+				+0.2
2,678,812	+				-0.1
2,678,813	+				-2.9
2,678,813	+				-0.6
2,678,818	+				-2.2
2,678,820	-				+0.7
2,678,820	-				-0.5
2,678,820	-				+1.5
2,678,823	+				-0.9
2,678,834	-				-0.3
2,678,862	-		Dshi_2515	0.11	+1.1
2,678,867	-		Dshi_2515	0.11	-0.3
2,678,874	+		Dshi_2515	0.12	-3.5
2,678,903	+		Dshi_2515	0.13	+4.1
2,678,903	+		Dshi_2515	0.13	+0.5
2,678,911	-		Dshi_2515	0.14	-1.9
2,678,937	+		Dshi_2515	0.15	+0.8
2,678,945	+		Dshi_2515	0.16	-0.2
2,678,953	-		Dshi_2515	0.16	-0.4
2,678,990	-		Dshi_2515	0.18	+2.0
2,679,001	+		Dshi_2515	0.19	-0.5
2,679,152	-		Dshi_2515	0.28	+2.3
2,679,168	-		Dshi_2515	0.29	-0.4
2,679,180	-		Dshi_2515	0.29	-1.2
2,679,289	-		Dshi_2515	0.36	+1.1
2,679,310	+		Dshi_2515	0.37	+1.8
2,679,449	+		Dshi_2515	0.45	+0.5
2,679,481	+		Dshi_2515	0.47	+0.3
2,679,485	+		Dshi_2515	0.47	-0.3
2,679,499	-		Dshi_2515	0.48	-1.3
2,679,504	-		Dshi_2515	0.48	+0.5
2,679,528	+		Dshi_2515	0.49	+2.5