Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2215

Experiment: m.b. Chloramphenicol 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.0002 mg/ml
2,339,759	+				-2.6
2,339,763	+				+4.2
2,339,763	+				-1.5
2,339,832	+				+1.9
2,339,840	-				+0.4
2,339,858	+				-0.6
2,339,858	+				+3.5
2,339,874	+				-0.5
2,339,877	-				+0.9
2,339,942	+		Dshi_2213	0.15	+2.7
2,339,962	+		Dshi_2213	0.20	-2.5
2,340,081	+		Dshi_2213	0.50	-1.6
2,340,081	+		Dshi_2213	0.50	-0.4
2,340,166	+		Dshi_2213	0.70	+0.5
2,340,166	-		Dshi_2213	0.70	+0.6
2,340,272	+				-0.1
2,340,312	-				-1.7
2,340,405	+		Dshi_2214	0.21	-0.9
2,340,413	-		Dshi_2214	0.24	+3.3
2,340,472	-		Dshi_2214	0.42	-1.5
2,340,497	+		Dshi_2214	0.49	+0.9
2,340,505	-		Dshi_2214	0.52	-3.1
2,340,564	+		Dshi_2214	0.69	-3.4
2,340,612	+		Dshi_2214	0.84	+2.9
2,340,672	+				-1.1
2,340,696	+				+0.9
2,340,704	-				-1.1
2,340,777	+		Dshi_2215	0.16	-0.2
2,340,780	-		Dshi_2215	0.16	-2.7
2,340,820	+		Dshi_2215	0.22	+0.9
2,340,820	+		Dshi_2215	0.22	-1.7
2,340,893	+		Dshi_2215	0.33	-0.7
2,340,893	+		Dshi_2215	0.33	+0.9
2,340,901	-		Dshi_2215	0.34	-2.3
2,340,998	-		Dshi_2215	0.49	-2.6
2,341,024	-		Dshi_2215	0.53	+0.4
2,341,048	+		Dshi_2215	0.56	+0.3
2,341,058	+		Dshi_2215	0.58	-0.0
2,341,066	-		Dshi_2215	0.59	-2.9
2,341,083	-		Dshi_2215	0.62	-1.5
2,341,129	-		Dshi_2215	0.69	-1.5
2,341,137	+		Dshi_2215	0.70	-1.3
2,341,162	+		Dshi_2215	0.74	-0.9
2,341,200	+		Dshi_2215	0.79	-2.1
2,341,208	-		Dshi_2215	0.81	-1.9
2,341,245	+		Dshi_2215	0.86	+0.9
2,341,278	-				-1.7
2,341,319	-				-1.1
2,341,340	-				-1.4
2,341,371	+				-0.1
2,341,436	+				-0.3
2,341,470	+				-1.5
2,341,499	-				+2.0
2,341,503	-				-1.1
2,341,561	+		Dshi_2216	0.17	-3.0
2,341,574	+		Dshi_2216	0.19	-0.9
2,341,650	-		Dshi_2216	0.31	-3.4
2,341,650	-		Dshi_2216	0.31	+2.1
2,341,652	+		Dshi_2216	0.32	-1.9
2,341,660	-		Dshi_2216	0.33	-0.5
2,341,698	+		Dshi_2216	0.39	-1.9
2,341,698	+		Dshi_2216	0.39	-1.1
2,341,764	+		Dshi_2216	0.49	-1.5
2,342,059	-				-1.1
2,342,134	+				-1.1
2,342,189	-		Dshi_2217	0.18	+0.9
2,342,203	-		Dshi_2217	0.24	-1.9
2,342,233	+		Dshi_2217	0.36	+0.3