Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2172

Experiment: m.b. Chloramphenicol 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.0002 mg/ml
2,299,318	+		Dshi_2169	0.54	-0.5
2,299,318	+		Dshi_2169	0.54	-0.2
2,299,318	+		Dshi_2169	0.54	+0.7
2,299,326	-		Dshi_2169	0.56	-0.7
2,299,336	-		Dshi_2169	0.59	-1.1
2,299,384	-		Dshi_2169	0.74	+0.8
2,299,395	+		Dshi_2169	0.77	-0.7
2,299,415	+		Dshi_2169	0.83	-1.5
2,299,415	+		Dshi_2169	0.83	-0.8
2,299,420	+		Dshi_2169	0.85	-2.7
2,299,423	-		Dshi_2169	0.85	-3.0
2,299,428	-		Dshi_2169	0.87	-0.9
2,299,444	+				+0.7
2,299,448	-				+0.0
2,299,462	-				-0.7
2,299,502	-				+0.8
2,299,698	+		Dshi_2170	0.54	-0.0
2,299,716	-		Dshi_2170	0.58	-0.8
2,299,716	-		Dshi_2170	0.58	-3.6
2,299,716	-		Dshi_2170	0.58	+1.8
2,299,733	-		Dshi_2170	0.62	-2.5
2,299,733	-		Dshi_2170	0.62	-2.6
2,299,762	-		Dshi_2170	0.69	-0.2
2,299,771	-		Dshi_2170	0.71	-1.7
2,299,847	+		Dshi_2170	0.90	-0.7
2,299,885	+				+0.4
2,299,886	+				-1.5
2,299,893	-				-2.9
2,299,893	-				-0.5
2,299,904	-				-1.5
2,300,005	-		Dshi_2171	0.23	-0.7
2,300,035	-		Dshi_2171	0.30	-1.1
2,300,114	-		Dshi_2171	0.49	-1.7
2,300,145	+		Dshi_2171	0.57	-1.3
2,300,153	-		Dshi_2171	0.59	-3.2
2,300,153	-		Dshi_2171	0.59	-0.7
2,300,195	-		Dshi_2171	0.69	+0.7
2,300,279	+		Dshi_2171	0.90	-1.5
2,300,321	+				+2.7
2,300,398	-		Dshi_2172	0.24	+1.7
2,300,433	-		Dshi_2172	0.34	-0.6
2,300,458	-		Dshi_2172	0.41	-0.4
2,300,553	-		Dshi_2172	0.69	+2.4
2,300,569	+		Dshi_2172	0.74	+2.3
2,300,603	+		Dshi_2172	0.84	-0.8
2,300,752	-		Dshi_2173	0.17	-1.1
2,300,781	-		Dshi_2173	0.22	+1.9
2,300,788	+		Dshi_2173	0.23	+0.6
2,300,805	+		Dshi_2173	0.26	+1.3
2,300,805	+		Dshi_2173	0.26	-0.3
2,300,813	-		Dshi_2173	0.27	-1.3
2,300,927	-		Dshi_2173	0.46	-1.9
2,301,027	+		Dshi_2173	0.63	-1.3
2,301,031	+		Dshi_2173	0.64	-2.5
2,301,040	+		Dshi_2173	0.65	-1.5
2,301,045	+		Dshi_2173	0.66	-2.3
2,301,050	+		Dshi_2173	0.67	-0.9
2,301,050	+		Dshi_2173	0.67	-2.7
2,301,058	-		Dshi_2173	0.69	+1.3
2,301,073	+		Dshi_2173	0.71	-1.7
2,301,081	-		Dshi_2173	0.72	-0.9
2,301,083	+		Dshi_2173	0.73	-1.5
2,301,208	+				+0.9
2,301,208	+				+1.4
2,301,224	-				-1.6
2,301,252	+				-0.1
2,301,300	+				-1.3
2,301,303	-				-2.4
2,301,309	+				-2.9
2,301,343	+				-2.3
2,301,382	-				+1.1
2,301,395	+				-1.5
2,301,460	+				+2.4
2,301,481	+				-2.1
2,301,515	+				-0.4
2,301,532	+		Dshi_2174	0.11	+2.0
2,301,547	-		Dshi_2174	0.12	-1.9
2,301,574	-		Dshi_2174	0.14	-1.3
2,301,619	-		Dshi_2174	0.18	+2.4
2,301,634	-		Dshi_2174	0.19	-1.7