Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2125

Experiment: m.b. Chloramphenicol 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.0002 mg/ml
2,254,749	-				-1.3
2,254,749	-				-0.7
2,254,799	+				+3.4
2,254,831	+				+3.3
2,254,839	-				-2.7
2,254,839	-				-1.1
2,254,897	-		Dshi_2124	0.10	+1.9
2,254,982	+		Dshi_2124	0.21	-1.1
2,255,011	+		Dshi_2124	0.25	+0.9
2,255,043	+		Dshi_2124	0.28	-0.8
2,255,077	-		Dshi_2124	0.33	-2.1
2,255,093	+		Dshi_2124	0.35	-2.4
2,255,097	+		Dshi_2124	0.35	-0.3
2,255,130	+		Dshi_2124	0.39	-2.1
2,255,140	+		Dshi_2124	0.41	-0.1
2,255,167	-		Dshi_2124	0.44	-1.2
2,255,172	+		Dshi_2124	0.45	+0.8
2,255,172	+		Dshi_2124	0.45	+0.9
2,255,197	+		Dshi_2124	0.48	-0.6
2,255,201	-		Dshi_2124	0.48	+0.4
2,255,235	-		Dshi_2124	0.52	-2.5
2,255,286	-		Dshi_2124	0.59	-0.7
2,255,430	+		Dshi_2124	0.77	+1.5
2,255,430	+		Dshi_2124	0.77	+0.9
2,255,438	-		Dshi_2124	0.78	-0.3
2,255,463	-		Dshi_2124	0.81	-0.9
2,255,479	+		Dshi_2124	0.83	+0.9
2,255,582	+				-0.8
2,255,593	-				+0.2
2,255,630	+				-1.7
2,255,648	+				-0.2
2,255,648	+				-2.1
2,255,656	-				-0.7
2,255,656	-				-1.9
2,255,745	+				-2.7
2,255,753	+				-0.8
2,255,753	-				-0.8
2,255,754	-				+0.7
2,255,764	-				+0.9
2,255,806	+		Dshi_2125	0.11	-0.2
2,255,911	+		Dshi_2125	0.22	-0.0
2,255,912	+		Dshi_2125	0.23	-0.8
2,255,928	-		Dshi_2125	0.24	+0.9
2,255,933	-		Dshi_2125	0.25	-0.1
2,255,965	-		Dshi_2125	0.28	-0.7
2,255,981	-		Dshi_2125	0.30	+0.1
2,256,058	+		Dshi_2125	0.39	-1.1
2,256,067	+		Dshi_2125	0.40	-0.7
2,256,072	+		Dshi_2125	0.40	-0.7
2,256,155	+		Dshi_2125	0.50	-1.2
2,256,161	-		Dshi_2125	0.50	-0.9
2,256,167	-		Dshi_2125	0.51	-0.2
2,256,184	+		Dshi_2125	0.53	-0.2
2,256,192	-		Dshi_2125	0.54	+0.9
2,256,211	-		Dshi_2125	0.56	-0.6
2,256,216	+		Dshi_2125	0.56	+0.6
2,256,242	+		Dshi_2125	0.59	-0.8
2,256,261	+		Dshi_2125	0.61	+0.3
2,256,279	+		Dshi_2125	0.63	-2.4
2,256,321	+		Dshi_2125	0.68	-0.7
2,256,339	-		Dshi_2125	0.70	+0.1
2,256,366	-		Dshi_2125	0.73	-1.7
2,256,368	+		Dshi_2125	0.73	-0.9
2,256,368	+		Dshi_2125	0.73	+1.1
2,256,376	-		Dshi_2125	0.74	+0.0
2,256,398	-		Dshi_2125	0.77	-0.2
2,256,406	-		Dshi_2125	0.78	-0.8
2,256,450	+		Dshi_2125	0.82	-1.3
2,256,460	+		Dshi_2125	0.84	-0.9
2,256,522	-				-0.8
2,256,591	+				+0.2
2,256,597	+				-3.9
2,256,597	+				+1.0
2,256,602	+				-0.3
2,256,602	+				-0.5
2,256,605	-				+0.1
2,256,683	+				-0.4
2,256,683	+				-3.5
2,256,683	+				-0.1
2,256,688	+				-0.1
2,256,691	-				-1.7
2,256,691	-				-0.5
2,256,691	-				+3.5
2,256,691	-				-1.1
2,256,691	-				+1.9
2,256,691	-				-0.9
2,256,695	-				-0.7
2,256,695	-				-2.8
2,256,697	+				-2.7
2,256,717	-				+0.9
2,256,717	-				-1.1
2,256,732	+				-0.1
2,256,732	+				-0.1
2,256,756	+				-2.5
2,256,756	+				+0.9
2,256,782	-				-3.2
2,256,821	+				-0.1
2,256,871	-		Dshi_2126	0.12	-0.2
2,256,877	-		Dshi_2126	0.12	-2.2
2,256,884	-		Dshi_2126	0.13	-0.7
2,256,887	-		Dshi_2126	0.13	-4.1
2,256,892	-		Dshi_2126	0.13	+1.8
2,256,894	-		Dshi_2126	0.14	-0.7
2,256,911	-		Dshi_2126	0.15	-3.2
2,256,958	+		Dshi_2126	0.19	-1.3
2,256,959	-		Dshi_2126	0.19	+0.0
2,256,961	-		Dshi_2126	0.19	-1.7
2,256,963	+		Dshi_2126	0.19	-4.0
2,257,003	+		Dshi_2126	0.22	-0.1
2,257,029	+		Dshi_2126	0.24	-0.1
2,257,132	+		Dshi_2126	0.33	-1.5
2,257,160	-		Dshi_2126	0.35	-1.7
2,257,195	+		Dshi_2126	0.38	-0.2
2,257,290	-		Dshi_2126	0.46	-1.4
2,257,297	+		Dshi_2126	0.46	+0.3
2,257,304	-		Dshi_2126	0.47	-4.8
2,257,304	-		Dshi_2126	0.47	-3.2
2,257,378	-		Dshi_2126	0.53	-1.8
2,257,387	-		Dshi_2126	0.54	-3.5
2,257,462	-		Dshi_2126	0.60	+0.9
2,257,485	+		Dshi_2126	0.61	-2.8
2,257,485	-		Dshi_2126	0.61	-0.4
2,257,535	-		Dshi_2126	0.66	-4.1
2,257,594	+		Dshi_2126	0.70	-0.7
2,257,594	+		Dshi_2126	0.70	-1.7