Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2053
Experiment: m.b. Chloramphenicol 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Chloramphenicol 0.0002 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,172,085 | + | Dshi_2052 | 0.26 | -0.8 | |
2,172,103 | + | Dshi_2052 | 0.37 | -0.7 | |
2,172,204 | - | -0.9 | |||
2,172,211 | - | -2.2 | |||
2,172,262 | + | +0.3 | |||
2,172,317 | + | -0.0 | |||
2,172,335 | - | -0.3 | |||
2,172,368 | - | +0.4 | |||
2,172,483 | - | -2.0 | |||
2,172,542 | + | -0.6 | |||
2,172,544 | + | -1.8 | |||
2,173,622 | - | -2.1 | |||
2,173,685 | + | -0.7 | |||
2,173,725 | - | -2.0 | |||
2,173,762 | + | Dshi_2054 | 0.13 | -0.0 | |
2,173,765 | - | Dshi_2054 | 0.13 | +1.4 | |
2,173,765 | - | Dshi_2054 | 0.13 | +0.6 | |
2,173,770 | - | Dshi_2054 | 0.14 | -3.1 | |
2,173,841 | - | Dshi_2054 | 0.20 | +1.0 | |
2,173,870 | - | Dshi_2054 | 0.22 | -0.0 | |
2,174,037 | + | Dshi_2054 | 0.37 | -0.0 | |
2,174,055 | - | Dshi_2054 | 0.39 | -3.9 | |
2,174,115 | - | Dshi_2054 | 0.44 | -1.3 | |
2,174,141 | - | Dshi_2054 | 0.46 | -1.3 | |
2,174,217 | - | Dshi_2054 | 0.53 | +1.3 | |
2,174,441 | + | Dshi_2054 | 0.73 | -1.3 |
Or see this region's nucleotide sequence