Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_R0040
Experiment: m.b. Chloramphenicol 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Chloramphenicol 0.0002 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,103,822 | - | Dshi_1989 | 0.49 | -1.9 | |
2,103,887 | - | Dshi_1989 | 0.54 | -2.3 | |
2,104,063 | + | Dshi_1989 | 0.68 | -0.5 | |
2,104,164 | - | Dshi_1989 | 0.77 | -1.0 | |
2,104,164 | - | Dshi_1989 | 0.77 | +0.2 | |
2,104,230 | - | Dshi_1989 | 0.82 | -2.0 | |
2,104,258 | - | Dshi_1989 | 0.84 | +1.0 | |
2,104,322 | - | Dshi_1989 | 0.89 | +3.3 | |
2,104,824 | + | -2.7 | |||
2,104,849 | + | -2.7 | |||
2,104,879 | - | -1.5 | |||
2,105,007 | + | Dshi_1990 | 0.11 | -0.0 | |
2,105,048 | + | Dshi_1990 | 0.13 | -1.0 | |
2,105,172 | - | +1.0 | |||
2,105,172 | - | Dshi_1990 | 0.19 | -1.6 | |
2,105,294 | - | Dshi_1990 | 0.24 | -0.5 | |
2,105,407 | + | Dshi_1990 | 0.29 | -1.4 | |
2,105,500 | - | Dshi_1990 | 0.33 | -2.6 |
Or see this region's nucleotide sequence