Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1986
Experiment: m.b. Chloramphenicol 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Chloramphenicol 0.0002 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,098,691 | + | Dshi_1985 | 0.64 | +1.0 | |
2,098,827 | - | Dshi_1985 | 0.73 | +0.7 | |
2,098,827 | - | Dshi_1985 | 0.73 | -1.6 | |
2,099,000 | + | Dshi_1985 | 0.85 | +1.0 | |
2,099,065 | - | Dshi_1985 | 0.89 | +0.3 | |
2,099,248 | + | +1.0 | |||
2,099,256 | - | -0.0 | |||
2,099,277 | - | -0.0 | |||
2,099,303 | + | -2.4 | |||
2,099,405 | - | +1.0 | |||
2,099,434 | + | -1.0 | |||
2,101,909 | - | -2.0 | |||
2,102,173 | - | +0.3 | |||
2,102,258 | + | Dshi_1987 | 0.15 | -2.6 | |
2,102,258 | + | Dshi_1987 | 0.15 | +2.2 | |
2,102,266 | - | Dshi_1987 | 0.17 | +3.0 | |
2,102,278 | + | Dshi_1987 | 0.19 | -2.0 | |
2,102,286 | - | Dshi_1987 | 0.21 | +1.0 | |
2,102,286 | - | Dshi_1987 | 0.21 | +0.2 | |
2,102,466 | - | Dshi_1987 | 0.53 | +1.7 | |
2,102,652 | + | Dshi_1987 | 0.87 | +2.4 |
Or see this region's nucleotide sequence