Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_5004

Experiment: m.b. Chloramphenicol 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.0002 mg/ml
2,079,158	-		Dshi_1968	0.72	-0.6
2,079,225	+		Dshi_1968	0.75	-1.0
2,079,257	+		Dshi_1968	0.76	+1.0
2,079,265	-		Dshi_1968	0.76	-3.0
2,079,339	-		Dshi_1968	0.79	-0.3
2,079,390	+		Dshi_1968	0.81	-0.0
2,079,391	-		Dshi_1968	0.81	-1.5
2,079,478	-		Dshi_1968	0.84	-2.6
2,079,479	-		Dshi_1968	0.84	-1.0
2,079,498	-		Dshi_1968	0.85	-0.6
2,079,537	+		Dshi_1968	0.86	-0.2
2,079,620	+		Dshi_1968	0.89	+1.4
2,079,625	+		Dshi_1968	0.90	-0.2
2,079,626	-		Dshi_1968	0.90	-2.6
2,079,633	-		Dshi_1968	0.90	+0.8
2,079,633	-		Dshi_1968	0.90	-1.4
2,079,720	+				-1.3
2,079,755	-				-1.7
2,079,814	+				+0.3
2,079,915	+				+0.5
2,079,923	+				-0.9
2,079,923	-				-1.7
2,079,970	-				-0.3
2,080,001	+				-1.2
2,080,109	-				-1.9
2,080,228	+				-0.3
2,080,231	+				-0.7
2,080,236	-				-3.3
2,080,237	+				-2.0
2,080,352	-		Dshi_5004	0.13	-2.9
2,080,393	+		Dshi_5004	0.15	+0.4
2,080,396	-		Dshi_5004	0.16	-1.0
2,080,398	-		Dshi_5004	0.16	-1.4
2,080,487	+		Dshi_5004	0.21	-0.0
2,080,494	-		Dshi_5004	0.21	-0.1
2,080,510	-		Dshi_5004	0.22	+0.8
2,080,549	+		Dshi_5004	0.25	-0.6
2,080,583	-		Dshi_5004	0.27	+0.0
2,080,811	-		Dshi_5004	0.40	-1.9
2,080,923	+		Dshi_5004	0.46	-0.2
2,080,945	+		Dshi_5004	0.48	-3.7
2,080,953	-		Dshi_5004	0.48	+2.5
2,080,988	+		Dshi_5004	0.50	+1.0
2,081,244	+		Dshi_5004	0.65	-1.7
2,081,261	+		Dshi_5004	0.66	+1.0
2,081,308	+		Dshi_5004	0.69	-0.6
2,081,308	+		Dshi_5004	0.69	-0.7
2,081,341	-		Dshi_5004	0.71	-0.3
2,081,346	-		Dshi_5004	0.71	+0.0
2,081,346	-		Dshi_5004	0.71	-3.5
2,081,346	-		Dshi_5004	0.71	-1.1
2,081,356	-		Dshi_5004	0.72	-3.0
2,081,405	+		Dshi_5004	0.74	+1.7
2,081,553	+		Dshi_5004	0.83	+0.2
2,081,553	+		Dshi_5004	0.83	-1.4
2,081,556	-		Dshi_5004	0.83	-0.6
2,081,556	-		Dshi_5004	0.83	-1.4
2,081,572	-		Dshi_5004	0.84	-0.3
2,081,596	+		Dshi_5004	0.86	-0.6
2,081,663	-		Dshi_5004	0.89	-3.9
2,081,745	+				-3.4
2,081,767	+				-0.1
2,081,811	-				-2.2
2,081,834	-				+0.0
2,081,899	-				-1.5
2,081,979	-				-1.3
2,081,985	+				+2.0
2,081,993	-				+1.1
2,082,013	-				-1.5
2,082,085	+		Dshi_1970	0.12	-1.6
2,082,102	+		Dshi_1970	0.13	-2.6
2,082,239	+		Dshi_1970	0.19	-0.0
2,082,241	-		Dshi_1970	0.19	+0.8
2,082,291	+		Dshi_1970	0.22	-1.6
2,082,334	-		Dshi_1970	0.24	-2.5
2,082,368	-		Dshi_1970	0.25	+3.9
2,082,378	-		Dshi_1970	0.26	-0.6
2,082,447	-		Dshi_1970	0.29	-2.7
2,082,488	+		Dshi_1970	0.31	+0.3
2,082,616	+		Dshi_1970	0.37	-2.4
2,082,639	+		Dshi_1970	0.39	-3.6
2,082,748	-		Dshi_1970	0.44	-1.9