Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1787

Experiment: m.b. Chloramphenicol 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.0002 mg/ml
1,858,514	+				-2.2
1,858,536	+				+0.3
1,858,536	+				-1.5
1,858,544	-				-0.5
1,858,624	+				-1.7
1,858,659	+				-1.2
1,858,661	+				-0.7
1,858,661	+				-0.5
1,858,679	-				+0.8
1,858,785	+		Dshi_1786	0.29	-2.5
1,858,800	+		Dshi_1786	0.32	-1.2
1,858,813	-		Dshi_1786	0.35	-1.2
1,858,844	+		Dshi_1786	0.42	-1.4
1,858,863	-		Dshi_1786	0.47	+0.8
1,858,883	+		Dshi_1786	0.51	+0.3
1,858,883	+		Dshi_1786	0.51	-3.6
1,859,070	+				-2.9
1,859,115	-				+0.2
1,860,050	+		Dshi_1788	0.34	-1.0
1,860,086	+		Dshi_1788	0.41	-2.2
1,860,100	-		Dshi_1788	0.43	-3.2
1,860,210	-		Dshi_1788	0.65	-3.2
1,860,313	+		Dshi_1788	0.84	-1.5
1,860,321	-		Dshi_1788	0.86	+0.8
1,860,321	-		Dshi_1788	0.86	+0.0
1,860,321	-		Dshi_1788	0.86	+0.8
1,860,344	+				+0.8
1,860,352	-				-2.0
1,860,354	+				+0.8
1,860,356	+				-0.2
1,860,356	+				-0.2
1,860,378	-				-2.3
1,860,380	-				-2.5
1,860,406	-				+0.4
1,860,420	-				-0.2
1,860,444	+				-0.7
1,860,453	+				-2.7
1,860,453	+				-0.6
1,860,461	-				-1.2
1,860,474	+				-0.2
1,860,486	+				+0.8
1,860,507	+				+2.4