Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1729
Experiment: m.b. Chloramphenicol 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Chloramphenicol 0.0002 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,796,422 | + | -0.4 | |||
1,796,440 | + | -1.8 | |||
1,796,457 | + | +1.2 | |||
1,796,467 | + | -2.0 | |||
1,796,631 | + | Dshi_1729 | 0.18 | +0.2 | |
1,796,770 | + | Dshi_1729 | 0.30 | -1.5 | |
1,796,948 | - | Dshi_1729 | 0.45 | -1.2 | |
1,797,077 | - | Dshi_1729 | 0.56 | +0.5 | |
1,797,130 | - | Dshi_1729 | 0.60 | -1.6 | |
1,797,151 | - | Dshi_1729 | 0.62 | -0.5 | |
1,797,260 | - | Dshi_1729 | 0.71 | -2.2 | |
1,797,307 | + | Dshi_1729 | 0.75 | +0.8 | |
1,797,317 | + | Dshi_1729 | 0.76 | -1.0 | |
1,797,358 | + | Dshi_1729 | 0.79 | +0.8 | |
1,797,358 | + | Dshi_1729 | 0.79 | -3.9 | |
1,797,368 | + | Dshi_1729 | 0.80 | -1.7 | |
1,797,437 | - | Dshi_1729 | 0.86 | -2.9 | |
1,798,281 | - | Dshi_1731 | 0.38 | +0.6 |
Or see this region's nucleotide sequence